AT4G31680

Description : Transcriptional factor B3 family protein

Gene families : OG_01_0000317 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000317_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G31680
Cluster	HCCA: Cluster_184

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT2G24681	No alias	AP2/B3-like transcriptional factor family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000217	DNA secondary structure binding	IEP	HCCA
CC	GO:0000228	nuclear chromosome	IEP	HCCA
MF	GO:0000404	heteroduplex DNA loop binding	IEP	HCCA
BP	GO:0000710	meiotic mismatch repair	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003684	damaged DNA binding	IEP	HCCA
MF	GO:0003872	6-phosphofructokinase activity	IEP	HCCA
MF	GO:0003886	DNA (cytosine-5-)-methyltransferase activity	IEP	HCCA
MF	GO:0004177	aminopeptidase activity	IEP	HCCA
MF	GO:0004609	phosphatidylserine decarboxylase activity	IEP	HCCA
CC	GO:0005945	6-phosphofructokinase complex	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006346	DNA methylation-dependent heterochromatin assembly	IEP	HCCA
MF	GO:0008187	poly-pyrimidine tract binding	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0008266	poly(U) RNA binding	IEP	HCCA
MF	GO:0008378	galactosyltransferase activity	IEP	HCCA
MF	GO:0008443	phosphofructokinase activity	IEP	HCCA
MF	GO:0009008	DNA-methyltransferase activity	IEP	HCCA
BP	GO:0009306	protein secretion	IEP	HCCA
BP	GO:0009410	response to xenobiotic stimulus	IEP	HCCA
BP	GO:0009830	cell wall modification involved in abscission	IEP	HCCA
BP	GO:0009901	anther dehiscence	IEP	HCCA
BP	GO:0010047	fruit dehiscence	IEP	HCCA
BP	GO:0010528	regulation of transposition	IEP	HCCA
BP	GO:0010529	negative regulation of transposition	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
MF	GO:0032135	DNA insertion or deletion binding	IEP	HCCA
CC	GO:0032300	mismatch repair complex	IEP	HCCA
MF	GO:0035197	siRNA binding	IEP	HCCA
BP	GO:0035592	establishment of protein localization to extracellular region	IEP	HCCA
BP	GO:0043570	maintenance of DNA repeat elements	IEP	HCCA
BP	GO:0044277	cell wall disassembly	IEP	HCCA
BP	GO:0045490	pectin catabolic process	IEP	HCCA
MF	GO:0047268	galactinol-raffinose galactosyltransferase activity	IEP	HCCA
BP	GO:0048240	sperm capacitation	IEP	HCCA
BP	GO:0048444	floral organ morphogenesis	IEP	HCCA
BP	GO:0048446	petal morphogenesis	IEP	HCCA
BP	GO:0048449	floral organ formation	IEP	HCCA
BP	GO:0048451	petal formation	IEP	HCCA
BP	GO:0048453	sepal formation	IEP	HCCA
BP	GO:0051026	chiasma assembly	IEP	HCCA
BP	GO:0060341	regulation of cellular localization	IEP	HCCA
MF	GO:0061980	regulatory RNA binding	IEP	HCCA
BP	GO:0071692	protein localization to extracellular region	IEP	HCCA
BP	GO:0080154	regulation of fertilization	IEP	HCCA
BP	GO:0080155	regulation of double fertilization forming a zygote and endosperm	IEP	HCCA
BP	GO:0080188	gene silencing by RNA-directed DNA methylation	IEP	HCCA
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
BP	GO:0140458	pre-transcriptional gene silencing by RNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
CC	GO:1990391	DNA repair complex	IEP	HCCA
BP	GO:2000008	regulation of protein localization to cell surface	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	249	345
IPR003340	B3_DNA-bd	23	95
IPR003340	B3_DNA-bd	149	243

External Links

PLAZA 3.0 Dicots	AT4G31680

AT4G31680

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation