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AT4G32380


Description : Pectin lyase-like superfamily protein


Gene families : OG_01_0001871 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001871_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G32380
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT4G32370 No alias Pectin lyase-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44830 No alias Pectin lyase-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44840 No alias Pectin lyase-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity ISS Interproscan
BP GO:0005975 carbohydrate metabolic process ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0033612 receptor serine/threonine kinase binding IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
BP GO:0050829 defense response to Gram-negative bacterium IEP HCCA
BP GO:0080113 regulation of seed growth IEP HCCA
MF GO:0098772 molecular function regulator IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:2000014 regulation of endosperm development IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 9 280
PLAZA 3.0 Dicots AT4G32380