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AT4G34120


Description : Cystathionine beta-synthase (CBS) family protein


Gene families : OG_01_0003238 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003238_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G34120
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Mp5g13370.1 No alias CBS domain-containing protein CBSX2, chloroplastic... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
BP GO:0042744 hydrogen peroxide catabolic process RCA Interproscan
BP GO:0045454 cell redox homeostasis IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000162 tryptophan biosynthetic process IEP HCCA
BP GO:0000165 MAPK cascade IEP HCCA
BP GO:0000919 cell plate assembly IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0001666 response to hypoxia IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004675 transmembrane receptor protein serine/threonine kinase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0004834 tryptophan synthase activity IEP HCCA
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005354 galactose transmembrane transporter activity IEP HCCA
MF GO:0005355 glucose transmembrane transporter activity IEP HCCA
MF GO:0005365 myo-inositol transmembrane transporter activity IEP HCCA
MF GO:0005402 carbohydrate:cation symporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006522 alanine metabolic process IEP HCCA
BP GO:0006524 alanine catabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006576 cellular biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006775 fat-soluble vitamin metabolic process IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006820 anion transport IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006873 cellular ion homeostasis IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006995 cellular response to nitrogen starvation IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008219 cell death IEP HCCA
BP GO:0008300 isoprenoid catabolic process IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0008970 phospholipase A1 activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009063 cellular amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid family metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009078 pyruvate family amino acid metabolic process IEP HCCA
BP GO:0009080 pyruvate family amino acid catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009310 amine catabolic process IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009423 chorismate biosynthetic process IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009595 detection of biotic stimulus IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009682 induced systemic resistance IEP HCCA
BP GO:0009683 indoleacetic acid metabolic process IEP HCCA
BP GO:0009684 indoleacetic acid biosynthetic process IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0009851 auxin biosynthetic process IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009920 cell plate formation involved in plant-type cell wall biogenesis IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
MF GO:0010294 abscisic acid glucosyltransferase activity IEP HCCA
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP HCCA
BP GO:0010324 membrane invagination IEP HCCA
BP GO:0010363 regulation of plant-type hypersensitive response IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015146 pentose transmembrane transporter activity IEP HCCA
MF GO:0015148 D-xylose transmembrane transporter activity IEP HCCA
MF GO:0015149 hexose transmembrane transporter activity IEP HCCA
MF GO:0015166 polyol transmembrane transporter activity IEP HCCA
MF GO:0015168 glycerol transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
MF GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity IEP HCCA
MF GO:0015575 mannitol transmembrane transporter activity IEP HCCA
MF GO:0015576 sorbitol transmembrane transporter activity IEP HCCA
MF GO:0015591 D-ribose transmembrane transporter activity IEP HCCA
BP GO:0015695 organic cation transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transport IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016045 detection of bacterium IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016107 sesquiterpenoid catabolic process IEP HCCA
BP GO:0016115 terpenoid catabolic process IEP HCCA
BP GO:0016145 S-glycoside catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
MF GO:0019137 thioglucosidase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019481 L-alanine catabolic process, by transamination IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0019759 glycosinolate catabolic process IEP HCCA
BP GO:0019762 glucosinolate catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0030003 cellular cation homeostasis IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034214 protein hexamerization IEP HCCA
BP GO:0034613 cellular protein localization IEP HCCA
BP GO:0034614 cellular response to reactive oxygen species IEP HCCA
BP GO:0034754 cellular hormone metabolic process IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0036294 cellular response to decreased oxygen levels IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042343 indole glucosinolate metabolic process IEP HCCA
BP GO:0042344 indole glucosinolate catabolic process IEP HCCA
BP GO:0042362 fat-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042371 vitamin K biosynthetic process IEP HCCA
BP GO:0042372 phylloquinone biosynthetic process IEP HCCA
BP GO:0042373 vitamin K metabolic process IEP HCCA
BP GO:0042374 phylloquinone metabolic process IEP HCCA
BP GO:0042401 cellular biogenic amine biosynthetic process IEP HCCA
BP GO:0042402 cellular biogenic amine catabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042435 indole-containing compound biosynthetic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0042851 L-alanine metabolic process IEP HCCA
BP GO:0042853 L-alanine catabolic process IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
BP GO:0043069 negative regulation of programmed cell death IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043290 apocarotenoid catabolic process IEP HCCA
MF GO:0043295 glutathione binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0043562 cellular response to nitrogen levels IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0043900 obsolete regulation of multi-organism process IEP HCCA
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP HCCA
BP GO:0044106 cellular amine metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0045431 flavonol synthase activity IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046218 indolalkylamine catabolic process IEP HCCA
BP GO:0046219 indolalkylamine biosynthetic process IEP HCCA
BP GO:0046345 abscisic acid catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046417 chorismate metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0047617 acyl-CoA hydrolase activity IEP HCCA
MF GO:0047635 alanine-oxo-acid transaminase activity IEP HCCA
MF GO:0047714 galactolipase activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048585 negative regulation of response to stimulus IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
BP GO:0050801 ion homeostasis IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052482 defense response by cell wall thickening IEP HCCA
BP GO:0052542 defense response by callose deposition IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
BP GO:0052544 defense response by callose deposition in cell wall IEP HCCA
BP GO:0052545 callose localization IEP HCCA
BP GO:0055080 cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0060548 negative regulation of cell death IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070301 cellular response to hydrogen peroxide IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071453 cellular response to oxygen levels IEP HCCA
BP GO:0071456 cellular response to hypoxia IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097243 flavonoid binding IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0098543 detection of other organism IEP HCCA
BP GO:0120256 olefinic compound catabolic process IEP HCCA
MF GO:1900750 oligopeptide binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA
MF GO:2001147 camalexin binding IEP HCCA
MF GO:2001227 quercitrin binding IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 173 226
IPR000644 CBS_dom 79 133
PLAZA 3.0 Dicots AT4G34120