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AT4G34370


Description : RING/U-box superfamily protein


Gene families : OG_01_0001981 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001981_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G34370
Cluster HCCA: Cluster_224


Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006635 fatty acid beta-oxidation RCA Interproscan
BP GO:0007165 signal transduction RCA Interproscan
BP GO:0009755 hormone-mediated signaling pathway RCA Interproscan
BP GO:0016558 protein import into peroxisome matrix RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000302 response to reactive oxygen species IEP HCCA
BP GO:0000578 embryonic axis specification IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005451 monovalent cation:proton antiporter activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006814 sodium ion transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007163 establishment or maintenance of cell polarity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009798 axis specification IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0009942 longitudinal axis specification IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
MF GO:0015081 sodium ion transmembrane transporter activity IEP HCCA
MF GO:0015298 solute:cation antiporter activity IEP HCCA
MF GO:0015299 solute:proton antiporter activity IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
MF GO:0015491 cation:cation antiporter activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030010 establishment of cell polarity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034220 ion transmembrane transport IEP HCCA
BP GO:0035725 sodium ion transmembrane transport IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
BP GO:0042938 dipeptide transport IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
MF GO:0051139 metal ion:proton antiporter activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
BP GO:0098655 cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002867 IBR_dom 195 256
PLAZA 3.0 Dicots AT4G34370