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Description : SWI-SNF-related chromatin binding protein
Gene families : OG_01_0001079 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001079_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G20240 | |
| Cluster | HCCA: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G20290 | No alias | SWI-SNF-related chromatin binding protein | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G20795 | No alias | F-box family protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G20800 | No alias | F-box family protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G57580 | No alias | F-box family protein | 0.1 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005739 | mitochondrion | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000156 | phosphorelay response regulator activity | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003886 | DNA (cytosine-5-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0004022 | alcohol dehydrogenase (NAD+) activity | IEP | HCCA |
| MF | GO:0004150 | dihydroneopterin aldolase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005200 | structural constituent of cytoskeleton | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0009008 | DNA-methyltransferase activity | IEP | HCCA |
| BP | GO:0009410 | response to xenobiotic stimulus | IEP | HCCA |
| BP | GO:0009736 | cytokinin-activated signaling pathway | IEP | HCCA |
| MF | GO:0009824 | AMP dimethylallyltransferase activity | IEP | HCCA |
| MF | GO:0015386 | potassium:proton antiporter activity | IEP | HCCA |
| MF | GO:0018455 | alcohol dehydrogenase [NAD(P)+] activity | IEP | HCCA |
| CC | GO:0019005 | SCF ubiquitin ligase complex | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0022821 | potassium ion antiporter activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0045551 | cinnamyl-alcohol dehydrogenase activity | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0052622 | ATP dimethylallyltransferase activity | IEP | HCCA |
| MF | GO:0052623 | ADP dimethylallyltransferase activity | IEP | HCCA |
| MF | GO:0060089 | molecular transducer activity | IEP | HCCA |
| BP | GO:0060688 | regulation of morphogenesis of a branching structure | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1905428 | regulation of plant organ formation | IEP | HCCA |
| MF | GO:1990135 | flavonoid sulfotransferase activity | IEP | HCCA |
| BP | GO:2000032 | regulation of secondary shoot formation | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT1G20240 |