AT1G20440

Description : cold-regulated 47

Gene families : OG_01_0009837 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G20440
Cluster	HCCA: Cluster_67

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006090	pyruvate metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006096	glycolytic process	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006165	nucleoside diphosphate phosphorylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006757	ATP generation from ADP	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006833	water transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006970	response to osmotic stress	IGI	Interproscan
BP	GO:0006972	hyperosmotic response	RCA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007030	Golgi organization	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009132	nucleoside diphosphate metabolic process	None	Extended
BP	GO:0009135	purine nucleoside diphosphate metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	None	Extended
BP	GO:0009185	ribonucleoside diphosphate metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	RCA	Interproscan
BP	GO:0009408	response to heat	None	Extended
BP	GO:0009409	response to cold	IEP	Interproscan
BP	GO:0009414	response to water deprivation	IMP	Interproscan
BP	GO:0009415	response to water	ISS	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009631	cold acclimation	IGI	Interproscan
BP	GO:0009631	cold acclimation	ISS	Interproscan
BP	GO:0009651	response to salt stress	RCA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010286	heat acclimation	IEP	Interproscan
BP	GO:0010286	heat acclimation	RCA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042044	fluid transport	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046031	ADP metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046686	response to cadmium ion	RCA	Interproscan
BP	GO:0046939	nucleotide phosphorylation	None	Extended
BP	GO:0050832	defense response to fungus	IEP	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	IEP	HCCA
BP	GO:0002831	regulation of response to biotic stimulus	IEP	HCCA
MF	GO:0004310	farnesyl-diphosphate farnesyltransferase activity	IEP	HCCA
MF	GO:0004311	farnesyltranstransferase activity	IEP	HCCA
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0004722	protein serine/threonine phosphatase activity	IEP	HCCA
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0005985	sucrose metabolic process	IEP	HCCA
BP	GO:0005986	sucrose biosynthetic process	IEP	HCCA
BP	GO:0006059	hexitol metabolic process	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006470	protein dephosphorylation	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006775	fat-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0007568	aging	IEP	HCCA
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	HCCA
MF	GO:0008378	galactosyltransferase activity	IEP	HCCA
MF	GO:0008909	isochorismate synthase activity	IEP	HCCA
BP	GO:0009268	response to pH	IEP	HCCA
BP	GO:0009269	response to desiccation	IEP	HCCA
BP	GO:0009611	response to wounding	IEP	HCCA
BP	GO:0009642	response to light intensity	IEP	HCCA
BP	GO:0009644	response to high light intensity	IEP	HCCA
BP	GO:0009723	response to ethylene	IEP	HCCA
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009753	response to jasmonic acid	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009788	negative regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009863	salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0009968	negative regulation of signal transduction	IEP	HCCA
BP	GO:0010017	red or far-red light signaling pathway	IEP	HCCA
BP	GO:0010029	regulation of seed germination	IEP	HCCA
BP	GO:0010109	regulation of photosynthesis	IEP	HCCA
BP	GO:0010119	regulation of stomatal movement	IEP	HCCA
BP	GO:0010150	leaf senescence	IEP	HCCA
BP	GO:0010205	photoinhibition	IEP	HCCA
BP	GO:0010325	raffinose family oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	HCCA
MF	GO:0010436	carotenoid dioxygenase activity	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0010648	negative regulation of cell communication	IEP	HCCA
BP	GO:0010941	regulation of cell death	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
BP	GO:0019400	alditol metabolic process	IEP	HCCA
BP	GO:0019401	alditol biosynthetic process	IEP	HCCA
BP	GO:0019406	hexitol biosynthetic process	IEP	HCCA
BP	GO:0019593	mannitol biosynthetic process	IEP	HCCA
BP	GO:0019594	mannitol metabolic process	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
BP	GO:0023057	negative regulation of signaling	IEP	HCCA
BP	GO:0031647	regulation of protein stability	IEP	HCCA
BP	GO:0032101	regulation of response to external stimulus	IEP	HCCA
MF	GO:0035250	UDP-galactosyltransferase activity	IEP	HCCA
BP	GO:0042362	fat-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042371	vitamin K biosynthetic process	IEP	HCCA
BP	GO:0042372	phylloquinone biosynthetic process	IEP	HCCA
BP	GO:0042373	vitamin K metabolic process	IEP	HCCA
BP	GO:0042374	phylloquinone metabolic process	IEP	HCCA
BP	GO:0042538	hyperosmotic salinity response	IEP	HCCA
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	HCCA
BP	GO:0043067	regulation of programmed cell death	IEP	HCCA
BP	GO:0043069	negative regulation of programmed cell death	IEP	HCCA
BP	GO:0043155	negative regulation of photosynthesis, light reaction	IEP	HCCA
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0045088	regulation of innate immune response	IEP	HCCA
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	IEP	HCCA
BP	GO:0046165	alcohol biosynthetic process	IEP	HCCA
MF	GO:0047216	inositol 3-alpha-galactosyltransferase activity	IEP	HCCA
MF	GO:0047274	galactinol-sucrose galactosyltransferase activity	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0048585	negative regulation of response to stimulus	IEP	HCCA
MF	GO:0050486	intramolecular transferase activity, transferring hydroxy groups	IEP	HCCA
BP	GO:0050776	regulation of immune response	IEP	HCCA
BP	GO:0050821	protein stabilization	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0060548	negative regulation of cell death	IEP	HCCA
BP	GO:0070542	response to fatty acid	IEP	HCCA
MF	GO:0070696	transmembrane receptor protein serine/threonine kinase binding	IEP	HCCA
BP	GO:0071214	cellular response to abiotic stimulus	IEP	HCCA
BP	GO:0071478	cellular response to radiation	IEP	HCCA
BP	GO:0071482	cellular response to light stimulus	IEP	HCCA
BP	GO:0071489	cellular response to red or far red light	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
MF	GO:0080103	4-methylthiopropyl glucosinolate S-oxygenase activity	IEP	HCCA
MF	GO:0080107	8-methylthiopropyl glucosinolate S-oxygenase activity	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0080135	regulation of cellular response to stress	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
BP	GO:0090693	plant organ senescence	IEP	HCCA
BP	GO:0104004	cellular response to environmental stimulus	IEP	HCCA
BP	GO:1900140	regulation of seedling development	IEP	HCCA
BP	GO:1901419	regulation of response to alcohol	IEP	HCCA
BP	GO:1901420	negative regulation of response to alcohol	IEP	HCCA
BP	GO:1902456	regulation of stomatal opening	IEP	HCCA
CC	GO:1903293	phosphatase complex	IEP	HCCA
BP	GO:1905156	negative regulation of photosynthesis	IEP	HCCA
BP	GO:1905957	regulation of cellular response to alcohol	IEP	HCCA
BP	GO:1905958	negative regulation of cellular response to alcohol	IEP	HCCA
BP	GO:2000070	regulation of response to water deprivation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000167	Dehydrin	48	198

External Links

PLAZA 3.0 Dicots	AT1G20440

AT1G20440

Expression Profile

Co-expression Networks

Functional Annotation