AT4G36590

Description : MADS-box transcription factor family protein

Gene families : OG_01_0004200 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004200_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G36590
Cluster	HCCA: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
AT1G65360	No alias	AGAMOUS-like 23	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G24840	No alias	AGAMOUS-like 61	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G60440	No alias	AGAMOUS-like 62	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0046910	pectinesterase inhibitor activity	IEP	HCCA
MF	GO:0050113	inositol oxygenase activity	IEP	HCCA
BP	GO:0080113	regulation of seed growth	IEP	HCCA
MF	GO:0098772	molecular function regulator	IEP	HCCA
BP	GO:2000014	regulation of endosperm development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	15	62

External Links

PLAZA 3.0 Dicots	AT4G36590