| CC | GO:0000502 | proteasome complex | IDA | Interproscan |
| CC | GO:0000502 | proteasome complex | TAS | Interproscan |
| MF | GO:0001653 | peptide receptor activity | IDA | Interproscan |
| BP | GO:0003006 | developmental process involved in reproduction | None | Extended |
| MF | GO:0003674 | molecular_function | None | Extended |
| CC | GO:0005575 | cellular_component | None | Extended |
| CC | GO:0005634 | nucleus | TAS | Interproscan |
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| CC | GO:0005829 | cytosol | IDA | Interproscan |
| BP | GO:0005975 | carbohydrate metabolic process | None | Extended |
| BP | GO:0005996 | monosaccharide metabolic process | None | Extended |
| BP | GO:0006006 | glucose metabolic process | None | Extended |
| BP | GO:0006082 | organic acid metabolic process | None | Extended |
| BP | GO:0006090 | pyruvate metabolic process | None | Extended |
| BP | GO:0006091 | generation of precursor metabolites and energy | None | Extended |
| BP | GO:0006094 | gluconeogenesis | RCA | Interproscan |
| BP | GO:0006096 | glycolytic process | RCA | Interproscan |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | None | Extended |
| BP | GO:0006163 | purine nucleotide metabolic process | None | Extended |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | None | Extended |
| BP | GO:0006508 | proteolysis | None | Extended |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | RCA | Interproscan |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | TAS | Interproscan |
| BP | GO:0006605 | protein targeting | None | Extended |
| BP | GO:0006623 | protein targeting to vacuole | RCA | Interproscan |
| BP | GO:0006629 | lipid metabolic process | None | Extended |
| BP | GO:0006631 | fatty acid metabolic process | None | Extended |
| BP | GO:0006635 | fatty acid beta-oxidation | RCA | Interproscan |
| BP | GO:0006725 | cellular aromatic compound metabolic process | None | Extended |
| BP | GO:0006753 | nucleoside phosphate metabolic process | None | Extended |
| BP | GO:0006757 | ATP generation from ADP | None | Extended |
| BP | GO:0006793 | phosphorus metabolic process | None | Extended |
| BP | GO:0006796 | phosphate-containing compound metabolic process | None | Extended |
| BP | GO:0006807 | nitrogen compound metabolic process | None | Extended |
| BP | GO:0006810 | transport | None | Extended |
| BP | GO:0006833 | water transport | RCA | Interproscan |
| BP | GO:0006886 | intracellular protein transport | None | Extended |
| BP | GO:0006950 | response to stress | None | Extended |
| BP | GO:0006970 | response to osmotic stress | None | Extended |
| BP | GO:0006972 | hyperosmotic response | RCA | Interproscan |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IMP | Interproscan |
| BP | GO:0006996 | organelle organization | None | Extended |
| BP | GO:0007010 | cytoskeleton organization | RCA | Interproscan |
| BP | GO:0007030 | Golgi organization | RCA | Interproscan |
| BP | GO:0007034 | vacuolar transport | None | Extended |
| BP | GO:0007275 | multicellular organism development | None | Extended |
| BP | GO:0007568 | aging | None | Extended |
| BP | GO:0008104 | protein localization | None | Extended |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0008152 | metabolic process | None | Extended |
| CC | GO:0008540 | proteasome regulatory particle, base subcomplex | IDA | Interproscan |
| CC | GO:0008540 | proteasome regulatory particle, base subcomplex | ISS | Interproscan |
| BP | GO:0009056 | catabolic process | None | Extended |
| BP | GO:0009057 | macromolecule catabolic process | None | Extended |
| BP | GO:0009058 | biosynthetic process | None | Extended |
| BP | GO:0009062 | fatty acid catabolic process | None | Extended |
| BP | GO:0009117 | nucleotide metabolic process | None | Extended |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | None | Extended |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | None | Extended |
| BP | GO:0009150 | purine ribonucleotide metabolic process | None | Extended |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | None | Extended |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | None | Extended |
| BP | GO:0009259 | ribonucleotide metabolic process | None | Extended |
| BP | GO:0009266 | response to temperature stimulus | RCA | Interproscan |
| BP | GO:0009404 | toxin metabolic process | None | Extended |
| BP | GO:0009407 | toxin catabolic process | RCA | Interproscan |
| BP | GO:0009408 | response to heat | IMP | Interproscan |
| BP | GO:0009555 | pollen development | IMP | Interproscan |
| BP | GO:0009628 | response to abiotic stimulus | None | Extended |
| BP | GO:0009651 | response to salt stress | IMP | Interproscan |
| BP | GO:0009651 | response to salt stress | RCA | Interproscan |
| BP | GO:0009719 | response to endogenous stimulus | None | Extended |
| BP | GO:0009725 | response to hormone | None | Extended |
| BP | GO:0009733 | response to auxin | IMP | Interproscan |
| BP | GO:0009735 | response to cytokinin | IMP | Interproscan |
| BP | GO:0009735 | response to cytokinin | IEP | Interproscan |
| BP | GO:0009735 | response to cytokinin | RCA | Interproscan |
| BP | GO:0009737 | response to abscisic acid | IMP | Interproscan |
| BP | GO:0009743 | response to carbohydrate | None | Extended |
| BP | GO:0009744 | response to sucrose | IMP | Interproscan |
| BP | GO:0009791 | post-embryonic development | None | Extended |
| BP | GO:0009853 | photorespiration | RCA | Interproscan |
| BP | GO:0009987 | cellular process | None | Extended |
| BP | GO:0010029 | regulation of seed germination | IMP | Interproscan |
| BP | GO:0010033 | response to organic substance | None | Extended |
| BP | GO:0010035 | response to inorganic substance | None | Extended |
| BP | GO:0010038 | response to metal ion | None | Extended |
| BP | GO:0010150 | leaf senescence | IMP | Interproscan |
| BP | GO:0010498 | proteasomal protein catabolic process | RCA | Interproscan |
| BP | GO:0015031 | protein transport | None | Extended |
| CC | GO:0016020 | membrane | IDA | Interproscan |
| BP | GO:0016042 | lipid catabolic process | None | Extended |
| BP | GO:0016043 | cellular component organization | None | Extended |
| BP | GO:0016049 | cell growth | None | Extended |
| BP | GO:0016051 | carbohydrate biosynthetic process | None | Extended |
| BP | GO:0016052 | carbohydrate catabolic process | None | Extended |
| BP | GO:0016054 | organic acid catabolic process | None | Extended |
| BP | GO:0016310 | phosphorylation | None | Extended |
| BP | GO:0019318 | hexose metabolic process | None | Extended |
| BP | GO:0019319 | hexose biosynthetic process | None | Extended |
| BP | GO:0019395 | fatty acid oxidation | None | Extended |
| BP | GO:0019538 | protein metabolic process | None | Extended |
| BP | GO:0019637 | organophosphate metabolic process | None | Extended |
| BP | GO:0019693 | ribose phosphate metabolic process | None | Extended |
| BP | GO:0019748 | secondary metabolic process | None | Extended |
| BP | GO:0019752 | carboxylic acid metabolic process | None | Extended |
| BP | GO:0019941 | modification-dependent protein catabolic process | None | Extended |
| BP | GO:0022414 | reproductive process | None | Extended |
| BP | GO:0022607 | cellular component assembly | None | Extended |
| BP | GO:0030163 | protein catabolic process | TAS | Interproscan |
| BP | GO:0030258 | lipid modification | None | Extended |
| BP | GO:0032501 | multicellular organismal process | None | Extended |
| BP | GO:0032502 | developmental process | None | Extended |
| BP | GO:0032787 | monocarboxylic acid metabolic process | None | Extended |
| CC | GO:0032991 | protein-containing complex | None | Extended |
| BP | GO:0033036 | macromolecule localization | None | Extended |
| BP | GO:0033365 | protein localization to organelle | None | Extended |
| BP | GO:0033554 | cellular response to stress | None | Extended |
| BP | GO:0033993 | response to lipid | None | Extended |
| BP | GO:0034285 | response to disaccharide | None | Extended |
| BP | GO:0034440 | lipid oxidation | None | Extended |
| BP | GO:0034613 | cellular protein localization | None | Extended |
| BP | GO:0034622 | cellular protein-containing complex assembly | None | Extended |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | None | Extended |
| BP | GO:0035966 | response to topologically incorrect protein | None | Extended |
| MF | GO:0038023 | signaling receptor activity | None | Extended |
| BP | GO:0040007 | growth | None | Extended |
| BP | GO:0042044 | fluid transport | None | Extended |
| BP | GO:0042221 | response to chemical | None | Extended |
| BP | GO:0043094 | cellular metabolic compound salvage | None | Extended |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IMP | Interproscan |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | RCA | Interproscan |
| BP | GO:0043170 | macromolecule metabolic process | None | Extended |
| CC | GO:0043226 | organelle | None | Extended |
| CC | GO:0043227 | membrane-bounded organelle | None | Extended |
| CC | GO:0043229 | intracellular organelle | None | Extended |
| CC | GO:0043231 | intracellular membrane-bounded organelle | None | Extended |
| BP | GO:0043248 | proteasome assembly | IMP | Interproscan |
| BP | GO:0043248 | proteasome assembly | RCA | Interproscan |
| BP | GO:0043436 | oxoacid metabolic process | None | Extended |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | None | Extended |
| BP | GO:0043933 | protein-containing complex subunit organization | None | Extended |
| BP | GO:0044237 | cellular metabolic process | None | Extended |
| BP | GO:0044238 | primary metabolic process | None | Extended |
| BP | GO:0044242 | cellular lipid catabolic process | None | Extended |
| BP | GO:0044248 | cellular catabolic process | None | Extended |
| BP | GO:0044255 | cellular lipid metabolic process | None | Extended |
| BP | GO:0044260 | cellular macromolecule metabolic process | None | Extended |
| BP | GO:0044265 | cellular macromolecule catabolic process | None | Extended |
| BP | GO:0044281 | small molecule metabolic process | None | Extended |
| BP | GO:0044282 | small molecule catabolic process | None | Extended |
| BP | GO:0044283 | small molecule biosynthetic process | None | Extended |
| BP | GO:0045184 | establishment of protein localization | None | Extended |
| BP | GO:0046031 | ADP metabolic process | None | Extended |
| BP | GO:0046034 | ATP metabolic process | None | Extended |
| BP | GO:0046364 | monosaccharide biosynthetic process | None | Extended |
| BP | GO:0046395 | carboxylic acid catabolic process | None | Extended |
| BP | GO:0046483 | heterocycle metabolic process | None | Extended |
| BP | GO:0046686 | response to cadmium ion | RCA | Interproscan |
| BP | GO:0046907 | intracellular transport | None | Extended |
| BP | GO:0046939 | nucleotide phosphorylation | None | Extended |
| BP | GO:0048229 | gametophyte development | None | Extended |
| BP | GO:0048364 | root development | None | Extended |
| BP | GO:0048366 | leaf development | IMP | Interproscan |
| BP | GO:0048449 | floral organ formation | None | Extended |
| BP | GO:0048455 | stamen formation | IMP | Interproscan |
| BP | GO:0048528 | post-embryonic root development | IMP | Interproscan |
| BP | GO:0048580 | regulation of post-embryonic development | None | Extended |
| BP | GO:0048588 | developmental cell growth | None | Extended |
| BP | GO:0048589 | developmental growth | None | Extended |
| BP | GO:0048646 | anatomical structure formation involved in morphogenesis | None | Extended |
| BP | GO:0048767 | root hair elongation | IMP | Interproscan |
| BP | GO:0048767 | root hair elongation | RCA | Interproscan |
| BP | GO:0048827 | phyllome development | None | Extended |
| BP | GO:0048856 | anatomical structure development | None | Extended |
| BP | GO:0050789 | regulation of biological process | None | Extended |
| BP | GO:0050793 | regulation of developmental process | None | Extended |
| BP | GO:0050896 | response to stimulus | None | Extended |
| BP | GO:0051179 | localization | None | Extended |
| BP | GO:0051234 | establishment of localization | None | Extended |
| BP | GO:0051239 | regulation of multicellular organismal process | None | Extended |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | None | Extended |
| BP | GO:0051641 | cellular localization | None | Extended |
| BP | GO:0051649 | establishment of localization in cell | None | Extended |
| BP | GO:0051716 | cellular response to stimulus | None | Extended |
| BP | GO:0051788 | response to misfolded protein | IMP | Interproscan |
| BP | GO:0051788 | response to misfolded protein | RCA | Interproscan |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | None | Extended |
| MF | GO:0060089 | molecular transducer activity | None | Extended |
| BP | GO:0060560 | developmental growth involved in morphogenesis | None | Extended |
| BP | GO:0065003 | protein-containing complex assembly | None | Extended |
| BP | GO:0065007 | biological regulation | None | Extended |
| BP | GO:0070727 | cellular macromolecule localization | None | Extended |
| BP | GO:0071702 | organic substance transport | None | Extended |
| BP | GO:0071704 | organic substance metabolic process | None | Extended |
| BP | GO:0071705 | nitrogen compound transport | None | Extended |
| BP | GO:0071840 | cellular component organization or biogenesis | None | Extended |
| BP | GO:0072329 | monocarboxylic acid catabolic process | None | Extended |
| BP | GO:0072521 | purine-containing compound metabolic process | None | Extended |
| BP | GO:0072594 | establishment of protein localization to organelle | None | Extended |
| BP | GO:0072665 | protein localization to vacuole | None | Extended |
| BP | GO:0072666 | establishment of protein localization to vacuole | None | Extended |
| BP | GO:0080129 | proteasome core complex assembly | RCA | Interproscan |
| BP | GO:0090693 | plant organ senescence | None | Extended |
| BP | GO:0090696 | post-embryonic plant organ development | None | Extended |
| BP | GO:0097305 | response to alcohol | None | Extended |
| BP | GO:0098754 | detoxification | None | Extended |
| BP | GO:0099402 | plant organ development | None | Extended |
| CC | GO:0110165 | cellular anatomical entity | None | Extended |
| CC | GO:0140535 | intracellular protein-containing complex | None | Extended |
| BP | GO:1900140 | regulation of seedling development | None | Extended |
| BP | GO:1901135 | carbohydrate derivative metabolic process | None | Extended |
| BP | GO:1901360 | organic cyclic compound metabolic process | None | Extended |
| BP | GO:1901564 | organonitrogen compound metabolic process | None | Extended |
| BP | GO:1901565 | organonitrogen compound catabolic process | None | Extended |
| BP | GO:1901575 | organic substance catabolic process | None | Extended |
| BP | GO:1901576 | organic substance biosynthetic process | None | Extended |
| BP | GO:1901700 | response to oxygen-containing compound | None | Extended |
| CC | GO:1902494 | catalytic complex | None | Extended |
| CC | GO:1905368 | peptidase complex | None | Extended |
| CC | GO:1905369 | endopeptidase complex | None | Extended |
| BP | GO:1905393 | plant organ formation | None | Extended |
| BP | GO:2000026 | regulation of multicellular organismal development | None | Extended |