AT4G38630


Description : regulatory particle non-ATPase 10


Gene families : OG_01_0006718 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006718_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G38630
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
Cre16.g663500 No alias Protein degradation.26S proteasome.regulatory... 0.27 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g18070.1 No alias regulatory component RPN10 of 26S proteasome 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_20680V3.1 No alias regulatory particle non-ATPase 10 0.18 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IDA Interproscan
CC GO:0000502 proteasome complex TAS Interproscan
MF GO:0001653 peptide receptor activity IDA Interproscan
CC GO:0005634 nucleus TAS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006094 gluconeogenesis RCA Interproscan
BP GO:0006096 glycolytic process RCA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process RCA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Interproscan
BP GO:0006623 protein targeting to vacuole RCA Interproscan
BP GO:0006635 fatty acid beta-oxidation RCA Interproscan
BP GO:0006833 water transport RCA Interproscan
BP GO:0006972 hyperosmotic response RCA Interproscan
BP GO:0006974 cellular response to DNA damage stimulus IMP Interproscan
BP GO:0007010 cytoskeleton organization RCA Interproscan
BP GO:0007030 Golgi organization RCA Interproscan
CC GO:0008540 proteasome regulatory particle, base subcomplex IDA Interproscan
CC GO:0008540 proteasome regulatory particle, base subcomplex ISS Interproscan
BP GO:0009266 response to temperature stimulus RCA Interproscan
BP GO:0009407 toxin catabolic process RCA Interproscan
BP GO:0009408 response to heat IMP Interproscan
BP GO:0009555 pollen development IMP Interproscan
BP GO:0009651 response to salt stress IMP Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
BP GO:0009733 response to auxin IMP Interproscan
BP GO:0009735 response to cytokinin IMP Interproscan
BP GO:0009735 response to cytokinin IEP Interproscan
BP GO:0009735 response to cytokinin RCA Interproscan
BP GO:0009737 response to abscisic acid IMP Interproscan
BP GO:0009744 response to sucrose IMP Interproscan
BP GO:0009853 photorespiration RCA Interproscan
BP GO:0010029 regulation of seed germination IMP Interproscan
BP GO:0010150 leaf senescence IMP Interproscan
BP GO:0010498 proteasomal protein catabolic process RCA Interproscan
CC GO:0016020 membrane IDA Interproscan
BP GO:0030163 protein catabolic process TAS Interproscan
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IMP Interproscan
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process RCA Interproscan
BP GO:0043248 proteasome assembly IMP Interproscan
BP GO:0043248 proteasome assembly RCA Interproscan
BP GO:0046686 response to cadmium ion RCA Interproscan
BP GO:0048366 leaf development IMP Interproscan
BP GO:0048455 stamen formation IMP Interproscan
BP GO:0048528 post-embryonic root development IMP Interproscan
BP GO:0048767 root hair elongation IMP Interproscan
BP GO:0048767 root hair elongation RCA Interproscan
BP GO:0051788 response to misfolded protein IMP Interproscan
BP GO:0051788 response to misfolded protein RCA Interproscan
BP GO:0080129 proteasome core complex assembly RCA Interproscan
Type GO Term Name Evidence Source
CC GO:0000322 storage vacuole IEP HCCA
CC GO:0000323 lytic vacuole IEP HCCA
CC GO:0000326 protein storage vacuole IEP HCCA
CC GO:0000327 lytic vacuole within protein storage vacuole IEP HCCA
BP GO:0000741 karyogamy IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004634 phosphopyruvate hydratase activity IEP HCCA
MF GO:0004843 thiol-dependent deubiquitinase IEP HCCA
MF GO:0005267 potassium channel activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005654 nucleoplasm IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006120 mitochondrial electron transport, NADH to ubiquinone IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007005 mitochondrion organization IEP HCCA
BP GO:0007276 gamete generation IEP HCCA
BP GO:0007292 female gamete generation IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008242 omega peptidase activity IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
BP GO:0009647 skotomorphogenesis IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
BP GO:0010078 maintenance of root meristem identity IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010311 lateral root formation IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016004 phospholipase activator activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
CC GO:0022626 cytosolic ribosome IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0030054 cell junction IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0031537 regulation of anthocyanin metabolic process IEP HCCA
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0035266 meristem growth IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
MF GO:0045309 protein phosphorylated amino acid binding IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048232 male gamete generation IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0048829 root cap development IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
MF GO:0051219 phosphoprotein binding IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0060229 lipase activator activity IEP HCCA
BP GO:0060968 obsolete regulation of gene silencing IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0090351 seedling development IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR003903 UIM_dom 305 319
IPR003903 UIM_dom 223 236
IPR002035 VWF_A 6 115
PLAZA 3.0 Dicots AT4G38630