AT4G38800

Description : methylthioadenosine nucleosidase 1

Gene families : OG_01_0002911 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002911_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G38800
Cluster	HCCA: Cluster_254

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp2g12780.1	No alias	methylthioadenosine nucleosidase	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0000003	reproduction	IGI	Interproscan
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
BP	GO:0001944	vasculature development	IGI	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006555	methionine metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008477	purine nucleosidase activity	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
MF	GO:0008930	methylthioadenosine nucleosidase activity	IDA	Interproscan
MF	GO:0008930	methylthioadenosine nucleosidase activity	NAS	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009066	aspartate family amino acid metabolic process	None	Extended
BP	GO:0009067	aspartate family amino acid biosynthetic process	None	Extended
BP	GO:0009086	methionine biosynthetic process	None	Extended
BP	GO:0009116	nucleoside metabolic process	ISS	Interproscan
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009648	photoperiodism	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	None	Extended
BP	GO:0019509	L-methionine salvage from methylthioadenosine	IDA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043094	cellular metabolic compound salvage	None	Extended
BP	GO:0043102	amino acid salvage	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048573	photoperiodism, flowering	RCA	Interproscan
BP	GO:0048731	system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071265	L-methionine biosynthetic process	None	Extended
BP	GO:0071267	L-methionine salvage	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended
BP	GO:1901657	glycosyl compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000304	response to singlet oxygen	IEP	HCCA
CC	GO:0000322	storage vacuole	IEP	HCCA
CC	GO:0000326	protein storage vacuole	IEP	HCCA
BP	GO:0000719	photoreactive repair	IEP	HCCA
BP	GO:0001558	regulation of cell growth	IEP	HCCA
MF	GO:0003958	NADPH-hemoprotein reductase activity	IEP	HCCA
MF	GO:0004028	3-chloroallyl aldehyde dehydrogenase activity	IEP	HCCA
MF	GO:0004448	isocitrate dehydrogenase activity	IEP	HCCA
MF	GO:0004450	isocitrate dehydrogenase (NADP+) activity	IEP	HCCA
MF	GO:0004656	procollagen-proline 4-dioxygenase activity	IEP	HCCA
MF	GO:0004673	protein histidine kinase activity	IEP	HCCA
MF	GO:0004723	calcium-dependent protein serine/threonine phosphatase activity	IEP	HCCA
MF	GO:0005385	zinc ion transmembrane transporter activity	IEP	HCCA
MF	GO:0005483	soluble NSF attachment protein activity	IEP	HCCA
MF	GO:0005484	SNAP receptor activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005496	steroid binding	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
CC	GO:0005774	vacuolar membrane	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0006102	isocitrate metabolic process	IEP	HCCA
BP	GO:0006290	pyrimidine dimer repair	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006625	protein targeting to peroxisome	IEP	HCCA
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006811	ion transport	IEP	HCCA
BP	GO:0006812	cation transport	IEP	HCCA
BP	GO:0006829	zinc ion transport	IEP	HCCA
BP	GO:0006833	water transport	IEP	HCCA
BP	GO:0006858	extracellular transport	IEP	HCCA
BP	GO:0006882	cellular zinc ion homeostasis	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
BP	GO:0007031	peroxisome organization	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0008565	obsolete protein transporter activity	IEP	HCCA
BP	GO:0009062	fatty acid catabolic process	IEP	HCCA
CC	GO:0009516	leucoplast	IEP	HCCA
BP	GO:0009637	response to blue light	IEP	HCCA
BP	GO:0009641	shade avoidance	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
MF	GO:0010011	auxin binding	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010104	regulation of ethylene-activated signaling pathway	IEP	HCCA
BP	GO:0010105	negative regulation of ethylene-activated signaling pathway	IEP	HCCA
BP	GO:0010152	pollen maturation	IEP	HCCA
BP	GO:0010225	response to UV-C	IEP	HCCA
BP	GO:0010959	regulation of metal ion transport	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0015919	peroxisomal membrane transport	IEP	HCCA
CC	GO:0016021	integral component of membrane	IEP	HCCA
BP	GO:0016125	sterol metabolic process	IEP	HCCA
BP	GO:0016126	sterol biosynthetic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
BP	GO:0016558	protein import into peroxisome matrix	IEP	HCCA
MF	GO:0016653	oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor	IEP	HCCA
MF	GO:0016670	oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	HCCA
MF	GO:0016972	thiol oxidase activity	IEP	HCCA
BP	GO:0017038	protein import	IEP	HCCA
BP	GO:0018126	protein hydroxylation	IEP	HCCA
BP	GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	IEP	HCCA
MF	GO:0019003	GDP binding	IEP	HCCA
BP	GO:0019511	peptidyl-proline hydroxylation	IEP	HCCA
MF	GO:0019798	procollagen-proline dioxygenase activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0030308	negative regulation of cell growth	IEP	HCCA
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
MF	GO:0031543	peptidyl-proline dioxygenase activity	IEP	HCCA
MF	GO:0031545	peptidyl-proline 4-dioxygenase activity	IEP	HCCA
BP	GO:0032879	regulation of localization	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0034599	cellular response to oxidative stress	IEP	HCCA
BP	GO:0034613	cellular protein localization	IEP	HCCA
BP	GO:0034614	cellular response to reactive oxygen species	IEP	HCCA
BP	GO:0042044	fluid transport	IEP	HCCA
MF	GO:0042562	hormone binding	IEP	HCCA
BP	GO:0043157	response to cation stress	IEP	HCCA
BP	GO:0043266	regulation of potassium ion transport	IEP	HCCA
BP	GO:0043268	positive regulation of potassium ion transport	IEP	HCCA
BP	GO:0043269	regulation of ion transport	IEP	HCCA
BP	GO:0043270	positive regulation of ion transport	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0043574	peroxisomal transport	IEP	HCCA
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0045926	negative regulation of growth	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0048506	regulation of timing of meristematic phase transition	IEP	HCCA
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051049	regulation of transport	IEP	HCCA
BP	GO:0051050	positive regulation of transport	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
MF	GO:0051740	ethylene binding	IEP	HCCA
BP	GO:0055069	zinc ion homeostasis	IEP	HCCA
MF	GO:0060090	molecular adaptor activity	IEP	HCCA
BP	GO:0065002	intracellular protein transmembrane transport	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0070297	regulation of phosphorelay signal transduction system	IEP	HCCA
BP	GO:0070298	negative regulation of phosphorelay signal transduction system	IEP	HCCA
MF	GO:0070300	phosphatidic acid binding	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071452	cellular response to singlet oxygen	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0071806	protein transmembrane transport	IEP	HCCA
MF	GO:0072328	alkene binding	IEP	HCCA
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072662	protein localization to peroxisome	IEP	HCCA
BP	GO:0072663	establishment of protein localization to peroxisome	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
BP	GO:1902531	regulation of intracellular signal transduction	IEP	HCCA
BP	GO:1902532	negative regulation of intracellular signal transduction	IEP	HCCA
BP	GO:1902652	secondary alcohol metabolic process	IEP	HCCA
BP	GO:2001020	regulation of response to DNA damage stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000845	Nucleoside_phosphorylase_d	29	256

External Links

PLAZA 3.0 Dicots	AT4G38800

AT4G38800

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation