AT5G02160

Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Gene families : OG_01_0006805 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006805_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G02160
Cluster	HCCA: Cluster_141

Target	Alias	Description	ECC score	Gene Family Method
Pp3c13_7350V3.1	No alias	No annotation	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_5420V3.1	No alias	No annotation	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_10916.1	No alias	no hits & (original description: none)	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	None	Extended
BP	GO:0006873	cellular ion homeostasis	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009965	leaf morphogenesis	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019725	cellular homeostasis	None	Extended
BP	GO:0030003	cellular cation homeostasis	RCA	Interproscan
BP	GO:0030154	cell differentiation	RCA	Interproscan
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
BP	GO:0043085	positive regulation of catalytic activity	RCA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0045893	positive regulation of transcription, DNA-templated	RCA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002238	response to molecule of fungal origin	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0004176	ATP-dependent peptidase activity	IEP	HCCA
MF	GO:0004565	beta-galactosidase activity	IEP	HCCA
MF	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0005372	water transmembrane transporter activity	IEP	HCCA
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
CC	GO:0005782	peroxisomal matrix	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009534	chloroplast thylakoid	IEP	HCCA
CC	GO:0009538	photosystem I reaction center	IEP	HCCA
CC	GO:0009579	thylakoid	IEP	HCCA
BP	GO:0009631	cold acclimation	IEP	HCCA
BP	GO:0009641	shade avoidance	IEP	HCCA
BP	GO:0009704	de-etiolation	IEP	HCCA
BP	GO:0009765	photosynthesis, light harvesting	IEP	HCCA
BP	GO:0009769	photosynthesis, light harvesting in photosystem II	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
BP	GO:0010017	red or far-red light signaling pathway	IEP	HCCA
BP	GO:0010161	red light signaling pathway	IEP	HCCA
CC	GO:0010287	plastoglobule	IEP	HCCA
BP	GO:0010600	regulation of auxin biosynthetic process	IEP	HCCA
BP	GO:0010928	regulation of auxin mediated signaling pathway	IEP	HCCA
MF	GO:0015250	water channel activity	IEP	HCCA
MF	GO:0015925	galactosidase activity	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016168	chlorophyll binding	IEP	HCCA
BP	GO:0016485	protein processing	IEP	HCCA
BP	GO:0016560	protein import into peroxisome matrix, docking	IEP	HCCA
BP	GO:0019684	photosynthesis, light reaction	IEP	HCCA
CC	GO:0030076	light-harvesting complex	IEP	HCCA
CC	GO:0031350	intrinsic component of plastid membrane	IEP	HCCA
CC	GO:0031351	integral component of plastid membrane	IEP	HCCA
CC	GO:0031352	intrinsic component of plastid inner membrane	IEP	HCCA
CC	GO:0031353	integral component of plastid inner membrane	IEP	HCCA
CC	GO:0031356	intrinsic component of chloroplast inner membrane	IEP	HCCA
CC	GO:0031357	integral component of chloroplast inner membrane	IEP	HCCA
CC	GO:0031907	microbody lumen	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
CC	GO:0031976	plastid thylakoid	IEP	HCCA
CC	GO:0031984	organelle subcompartment	IEP	HCCA
BP	GO:0032350	regulation of hormone metabolic process	IEP	HCCA
BP	GO:0032879	regulation of localization	IEP	HCCA
BP	GO:0046885	regulation of hormone biosynthetic process	IEP	HCCA
BP	GO:0070417	cellular response to cold	IEP	HCCA
BP	GO:0071214	cellular response to abiotic stimulus	IEP	HCCA
BP	GO:0071489	cellular response to red or far red light	IEP	HCCA
BP	GO:0071491	cellular response to red light	IEP	HCCA
BP	GO:0090354	regulation of auxin metabolic process	IEP	HCCA
MF	GO:0097472	cyclin-dependent protein kinase activity	IEP	HCCA
BP	GO:0104004	cellular response to environmental stimulus	IEP	HCCA

No InterPro domains available for this sequence

External Links

PLAZA 3.0 Dicots	AT5G02160

AT5G02160

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation