AT5G02560

Description : histone H2A 12

Gene families : OG_01_0016557 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G02560
Cluster	HCCA: Cluster_119

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000808	origin recognition complex	IEP	HCCA
CC	GO:0000814	ESCRT II complex	IEP	HCCA
BP	GO:0002238	response to molecule of fungal origin	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0004806	triglyceride lipase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005345	purine nucleobase transmembrane transporter activity	IEP	HCCA
CC	GO:0005887	integral component of plasma membrane	IEP	HCCA
BP	GO:0006312	mitotic recombination	IEP	HCCA
BP	GO:0006406	mRNA export from nucleus	IEP	HCCA
BP	GO:0009639	response to red or far red light	IEP	HCCA
BP	GO:0010074	maintenance of meristem identity	IEP	HCCA
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	HCCA
MF	GO:0010385	double-stranded methylated DNA binding	IEP	HCCA
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015205	nucleobase transmembrane transporter activity	IEP	HCCA
BP	GO:0019722	calcium-mediated signaling	IEP	HCCA
BP	GO:0019827	stem cell population maintenance	IEP	HCCA
CC	GO:0036452	ESCRT complex	IEP	HCCA
BP	GO:0051028	mRNA transport	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0098727	maintenance of cell number	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	20	98
IPR032454	Histone_H2A_C	101	134

External Links

PLAZA 3.0 Dicots	AT5G02560