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  5. AT5G02670

AT5G02670


Description : BEST Arabidopsis thaliana protein match is: poly(A) polymerase 3 (TAIR:AT3G06560.1); Has 14 Blast hits to 8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG_01_0012194 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G02670
Cluster HCCA: Cluster_12


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000280 nuclear division IEP HCCA
CC GO:0000811 GINS complex IEP HCCA
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
BP GO:0002832 negative regulation of response to biotic stimulus IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004750 ribulose-phosphate 3-epimerase activity IEP HCCA
MF GO:0004789 thiamine-phosphate diphosphorylase activity IEP HCCA
MF GO:0004834 tryptophan synthase activity IEP HCCA
BP GO:0006089 lactate metabolic process IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006808 regulation of nitrogen utilization IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
MF GO:0008395 steroid hydroxylase activity IEP HCCA
MF GO:0008902 hydroxymethylpyrimidine kinase activity IEP HCCA
MF GO:0008972 phosphomethylpyrimidine kinase activity IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009438 methylglyoxal metabolic process IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010112 regulation of systemic acquired resistance IEP HCCA
BP GO:0010113 negative regulation of systemic acquired resistance IEP HCCA
BP GO:0010196 nonphotochemical quenching IEP HCCA
BP GO:0010268 brassinosteroid homeostasis IEP HCCA
BP GO:0010325 raffinose family oligosaccharide biosynthetic process IEP HCCA
BP GO:0010500 transmitting tissue development IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0018024 histone-lysine N-methyltransferase activity IEP HCCA
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
CC GO:0031261 DNA replication preinitiation complex IEP HCCA
BP GO:0032102 negative regulation of response to external stimulus IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0033984 indole-3-glycerol-phosphate lyase activity IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0042182 ketone catabolic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0046185 aldehyde catabolic process IEP HCCA
MF GO:0046976 histone methyltransferase activity (H3-K27 specific) IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048829 root cap development IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051596 methylglyoxal catabolic process IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0055070 copper ion homeostasis IEP HCCA
BP GO:0055088 lipid homeostasis IEP HCCA
BP GO:0061727 methylglyoxal catabolic process to lactate IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0070734 histone H3-K27 methylation IEP HCCA
BP GO:0080156 mitochondrial mRNA modification IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:1990066 energy quenching IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G02670