- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Plant self-incompatibility protein S1 family
Gene families : OG_01_0000255 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000255_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G04047 | |
| Cluster | HCCA: Cluster_64 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G06090 | No alias | Plant self-incompatibility protein S1 family | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT2G24880 | No alias | Plant self-incompatibility protein S1 family | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G24060 | No alias | Plant self-incompatibility protein S1 family | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G26860 | No alias | Plant self-incompatibility protein S1 family | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G26880 | No alias | Plant self-incompatibility protein S1 family | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G27331 | No alias | Plant self-incompatibility protein S1 family | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G27680 | No alias | Plant self-incompatibility protein S1 family | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT4G29037 | No alias | No description available | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G27238 | No alias | Plant self-incompatibility protein S1 family | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005576 | extracellular region | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004871 | obsolete signal transducer activity | IEP | HCCA |
| BP | GO:0006935 | chemotaxis | IEP | HCCA |
| BP | GO:0007267 | cell-cell signaling | IEP | HCCA |
| MF | GO:0009824 | AMP dimethylallyltransferase activity | IEP | HCCA |
| BP | GO:0010183 | pollen tube guidance | IEP | HCCA |
| BP | GO:0023052 | signaling | IEP | HCCA |
| BP | GO:0040011 | locomotion | IEP | HCCA |
| BP | GO:0042330 | taxis | IEP | HCCA |
| BP | GO:0045697 | regulation of synergid differentiation | IEP | HCCA |
| BP | GO:0050918 | positive chemotaxis | IEP | HCCA |
| MF | GO:0052622 | ATP dimethylallyltransferase activity | IEP | HCCA |
| MF | GO:0052623 | ADP dimethylallyltransferase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010264 | Self-incomp_S1 | 30 | 140 |
| PLAZA 3.0 Dicots | AT5G04047 |