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AT1G03040


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0001934 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G03040
Cluster HCCA: Cluster_91


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000077 DNA damage checkpoint signaling IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0000338 protein deneddylation IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0002376 immune system process IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004708 MAP kinase kinase activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
MF GO:0004713 protein tyrosine kinase activity IEP HCCA
MF GO:0005046 KDEL sequence binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
CC GO:0008180 COP9 signalosome IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009403 toxin biosynthetic process IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009700 indole phytoalexin biosynthetic process IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009873 ethylene-activated signaling pathway IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010099 regulation of photomorphogenesis IEP HCCA
BP GO:0010100 negative regulation of photomorphogenesis IEP HCCA
BP GO:0010120 camalexin biosynthetic process IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010387 COP9 signalosome assembly IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0010971 positive regulation of G2/M transition of mitotic cell cycle IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016233 telomere capping IEP HCCA
BP GO:0016441 posttranscriptional gene silencing IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019209 kinase activator activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030295 protein kinase activator activity IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
BP GO:0031570 DNA integrity checkpoint signaling IEP HCCA
MF GO:0031624 ubiquitin conjugating enzyme binding IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040020 regulation of meiotic nuclear division IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0042538 hyperosmotic salinity response IEP HCCA
BP GO:0042770 signal transduction in response to DNA damage IEP HCCA
BP GO:0043200 response to amino acid IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
MF GO:0044390 ubiquitin-like protein conjugating enzyme binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0045787 positive regulation of cell cycle IEP HCCA
BP GO:0045893 positive regulation of transcription, DNA-templated IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0045931 positive regulation of mitotic cell cycle IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046217 indole phytoalexin metabolic process IEP HCCA
BP GO:0046620 regulation of organ growth IEP HCCA
BP GO:0046621 negative regulation of organ growth IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0048235 pollen sperm cell differentiation IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048571 long-day photoperiodism IEP HCCA
BP GO:0048574 long-day photoperiodism, flowering IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048640 negative regulation of developmental growth IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051445 regulation of meiotic cell cycle IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051865 protein autoubiquitination IEP HCCA
BP GO:0052314 phytoalexin metabolic process IEP HCCA
BP GO:0052315 phytoalexin biosynthetic process IEP HCCA
BP GO:0052317 camalexin metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071470 cellular response to osmotic stress IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
BP GO:0090068 positive regulation of cell cycle process IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:1901989 positive regulation of cell cycle phase transition IEP HCCA
BP GO:1901992 positive regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1902751 positive regulation of cell cycle G2/M phase transition IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 155 199
PLAZA 3.0 Dicots AT1G03040