AT5G04910

Description : unknown protein; Has 71 Blast hits to 71 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).

Gene families : OG_01_0008753 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008753_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type

Description

Actions

Neighborhood

HRR: AT5G04910

Cluster

HCCA: Cluster_131

Functional Annotation

GO

Predicted GO

InterPro

Type GO Term Name Evidence Source

MF GO:0003674 molecular_function ND Interproscan

CC GO:0005575 cellular_component None Extended

CC GO:0005634 nucleus ISM Interproscan

BP GO:0006082 organic acid metabolic process None Extended

BP GO:0006629 lipid metabolic process None Extended

BP GO:0006631 fatty acid metabolic process None Extended

BP GO:0006635 fatty acid beta-oxidation RCA Interproscan

BP GO:0008150 biological_process ND Interproscan

BP GO:0008152 metabolic process None Extended

BP GO:0009056 catabolic process None Extended

BP GO:0009062 fatty acid catabolic process None Extended

BP GO:0009314 response to radiation None Extended

BP GO:0009416 response to light stimulus None Extended

BP GO:0009628 response to abiotic stimulus None Extended

BP GO:0009648 photoperiodism None Extended

BP GO:0009987 cellular process None Extended

BP GO:0016042 lipid catabolic process None Extended

BP GO:0016054 organic acid catabolic process None Extended

BP GO:0019395 fatty acid oxidation None Extended

BP GO:0019752 carboxylic acid metabolic process None Extended

BP GO:0022414 reproductive process None Extended

BP GO:0030258 lipid modification None Extended

BP GO:0032787 monocarboxylic acid metabolic process None Extended

BP GO:0034440 lipid oxidation None Extended

CC GO:0043226 organelle None Extended

CC GO:0043227 membrane-bounded organelle None Extended

CC GO:0043229 intracellular organelle None Extended

CC GO:0043231 intracellular membrane-bounded organelle None Extended

BP GO:0043436 oxoacid metabolic process None Extended

BP GO:0044237 cellular metabolic process None Extended

BP GO:0044238 primary metabolic process None Extended

BP GO:0044242 cellular lipid catabolic process None Extended

BP GO:0044248 cellular catabolic process None Extended

BP GO:0044255 cellular lipid metabolic process None Extended

BP GO:0044281 small molecule metabolic process None Extended

BP GO:0044282 small molecule catabolic process None Extended

BP GO:0046395 carboxylic acid catabolic process None Extended

BP GO:0048573 photoperiodism, flowering RCA Interproscan

BP GO:0050896 response to stimulus None Extended

BP GO:0071704 organic substance metabolic process None Extended

BP GO:0072329 monocarboxylic acid catabolic process None Extended

CC GO:0110165 cellular anatomical entity None Extended

BP GO:1901575 organic substance catabolic process None Extended

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Type GO Term Name Evidence Source

CC GO:0000159 protein phosphatase type 2A complex IEP HCCA

MF GO:0000213 tRNA-intron endonuclease activity IEP HCCA

CC GO:0000214 tRNA-intron endonuclease complex IEP HCCA

BP GO:0000304 response to singlet oxygen IEP HCCA

CC GO:0000322 storage vacuole IEP HCCA

CC GO:0000326 protein storage vacuole IEP HCCA

BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA

BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA

BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA

BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA

MF GO:0003723 RNA binding IEP HCCA

MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA

MF GO:0004298 threonine-type endopeptidase activity IEP HCCA

MF GO:0004518 nuclease activity IEP HCCA

MF GO:0004549 tRNA-specific ribonuclease activity IEP HCCA

MF GO:0005249 voltage-gated potassium channel activity IEP HCCA

MF GO:0005267 potassium channel activity IEP HCCA

CC GO:0005667 transcription regulator complex IEP HCCA

CC GO:0005681 spliceosomal complex IEP HCCA

CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP HCCA

BP GO:0006351 transcription, DNA-templated IEP HCCA

BP GO:0006352 DNA-templated transcription, initiation IEP HCCA

BP GO:0006366 transcription by RNA polymerase II IEP HCCA

BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA

BP GO:0006396 RNA processing IEP HCCA

BP GO:0006397 mRNA processing IEP HCCA

BP GO:0006528 asparagine metabolic process IEP HCCA

BP GO:0006530 asparagine catabolic process IEP HCCA

BP GO:0006573 valine metabolic process IEP HCCA

BP GO:0006574 valine catabolic process IEP HCCA

BP GO:0006807 nitrogen compound metabolic process IEP HCCA

BP GO:0006979 response to oxidative stress IEP HCCA

CC GO:0008076 voltage-gated potassium channel complex IEP HCCA

BP GO:0008284 positive regulation of cell population proliferation IEP HCCA

CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA

BP GO:0008380 RNA splicing IEP HCCA

MF GO:0008691 3-hydroxybutyryl-CoA dehydrogenase activity IEP HCCA

BP GO:0009063 cellular amino acid catabolic process IEP HCCA

BP GO:0009065 glutamine family amino acid catabolic process IEP HCCA

BP GO:0009068 aspartate family amino acid catabolic process IEP HCCA

BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA

BP GO:0009083 branched-chain amino acid catabolic process IEP HCCA

BP GO:0009745 sucrose mediated signaling IEP HCCA

BP GO:0009960 endosperm development IEP HCCA

MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA

BP GO:0016070 RNA metabolic process IEP HCCA

BP GO:0016071 mRNA metabolic process IEP HCCA

MF GO:0016289 CoA hydrolase activity IEP HCCA

CC GO:0016607 nuclear speck IEP HCCA

MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA

MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP HCCA

MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP HCCA

MF GO:0022843 voltage-gated cation channel activity IEP HCCA

CC GO:0031371 ubiquitin conjugating enzyme complex IEP HCCA

CC GO:0031372 UBC13-MMS2 complex IEP HCCA

CC GO:0032991 protein-containing complex IEP HCCA

BP GO:0033345 asparagine catabolic process via L-aspartate IEP HCCA

BP GO:0034599 cellular response to oxidative stress IEP HCCA

BP GO:0034614 cellular response to reactive oxygen species IEP HCCA

CC GO:0034702 ion channel complex IEP HCCA

CC GO:0034703 cation channel complex IEP HCCA

CC GO:0034705 potassium channel complex IEP HCCA

MF GO:0035064 methylated histone binding IEP HCCA

BP GO:0042127 regulation of cell population proliferation IEP HCCA

MF GO:0042393 histone binding IEP HCCA

BP GO:0043170 macromolecule metabolic process IEP HCCA

MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA

MF GO:0070003 threonine-type peptidase activity IEP HCCA

BP GO:0071452 cellular response to singlet oxygen IEP HCCA

BP GO:0090304 nucleic acid metabolic process IEP HCCA

BP GO:0097659 nucleic acid-templated transcription IEP HCCA

MF GO:0140030 modification-dependent protein binding IEP HCCA

MF GO:0140034 methylation-dependent protein binding IEP HCCA

CC GO:0140513 nuclear protein-containing complex IEP HCCA

CC GO:0140535 intracellular protein-containing complex IEP HCCA

BP GO:1901606 alpha-amino acid catabolic process IEP HCCA

CC GO:1902494 catalytic complex IEP HCCA

CC GO:1902555 endoribonuclease complex IEP HCCA

CC GO:1903293 phosphatase complex IEP HCCA

InterPro domains Description Start Stop

IPR039491 REX1-B 47 141

External Links

PLAZA 3.0 Dicots AT5G04910

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AT5G04910

Expression Profile

Co-expression Networks

Functional Annotation