AT5G05280

Description : RING/U-box superfamily protein

Gene families : OG_01_0000404 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G05280
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT1G49230	No alias	RING/U-box superfamily protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IDA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009555	pollen development	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009900	dehiscence	None	Extended
BP	GO:0009901	anther dehiscence	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010565	regulation of cellular ketone metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IDA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019216	regulation of lipid metabolic process	None	Extended
BP	GO:0019217	regulation of fatty acid metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042304	regulation of fatty acid biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046890	regulation of lipid biosynthetic process	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048437	floral organ development	None	Extended
BP	GO:0048443	stamen development	IMP	Interproscan
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0062012	regulation of small molecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080140	regulation of jasmonic acid metabolic process	None	Extended
BP	GO:0080141	regulation of jasmonic acid biosynthetic process	IMP	Interproscan
BP	GO:0099402	plant organ development	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000323	lytic vacuole	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004427	inorganic diphosphatase activity	IEP	HCCA
MF	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004805	trehalose-phosphatase activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006638	neutral lipid metabolic process	IEP	HCCA
BP	GO:0006639	acylglycerol metabolic process	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0008429	phosphatidylethanolamine binding	IEP	HCCA
MF	GO:0008506	sucrose:proton symporter activity	IEP	HCCA
MF	GO:0008515	sucrose transmembrane transporter activity	IEP	HCCA
MF	GO:0008794	arsenate reductase (glutaredoxin) activity	IEP	HCCA
MF	GO:0008970	phospholipase A1 activity	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
MF	GO:0009669	sucrose:cation symporter activity	IEP	HCCA
BP	GO:0009751	response to salicylic acid	IEP	HCCA
BP	GO:0009823	cytokinin catabolic process	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009962	regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0010101	post-embryonic root morphogenesis	IEP	HCCA
BP	GO:0010102	lateral root morphogenesis	IEP	HCCA
BP	GO:0010152	pollen maturation	IEP	HCCA
BP	GO:0010187	negative regulation of seed germination	IEP	HCCA
CC	GO:0010282	senescence-associated vacuole	IEP	HCCA
BP	GO:0010315	auxin efflux	IEP	HCCA
MF	GO:0010436	carotenoid dioxygenase activity	IEP	HCCA
BP	GO:0010541	acropetal auxin transport	IEP	HCCA
MF	GO:0015154	disaccharide transmembrane transporter activity	IEP	HCCA
MF	GO:0015157	oligosaccharide transmembrane transporter activity	IEP	HCCA
MF	GO:0016298	lipase activity	IEP	HCCA
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	HCCA
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	HCCA
MF	GO:0019203	carbohydrate phosphatase activity	IEP	HCCA
MF	GO:0030611	arsenate reductase activity	IEP	HCCA
MF	GO:0030613	oxidoreductase activity, acting on phosphorus or arsenic in donors	IEP	HCCA
MF	GO:0030614	oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor	IEP	HCCA
CC	GO:0031012	extracellular matrix	IEP	HCCA
BP	GO:0042447	hormone catabolic process	IEP	HCCA
BP	GO:0045490	pectin catabolic process	IEP	HCCA
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	IEP	HCCA
BP	GO:0046339	diacylglycerol metabolic process	IEP	HCCA
BP	GO:0046340	diacylglycerol catabolic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
BP	GO:0046461	neutral lipid catabolic process	IEP	HCCA
BP	GO:0046462	monoacylglycerol metabolic process	IEP	HCCA
BP	GO:0046464	acylglycerol catabolic process	IEP	HCCA
BP	GO:0046503	glycerolipid catabolic process	IEP	HCCA
BP	GO:0046777	protein autophosphorylation	IEP	HCCA
MF	GO:0047372	acylglycerol lipase activity	IEP	HCCA
BP	GO:0048653	anther development	IEP	HCCA
BP	GO:0052651	monoacylglycerol catabolic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	HCCA
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	112	155

External Links

PLAZA 3.0 Dicots	AT5G05280

AT5G05280

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation