AT5G05290

Description : expansin A2

Gene families : OG_01_0000011 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G05290
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AT3G15370	No alias	expansin 12	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G01630	No alias	expansin A17	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G02260	No alias	expansin A9	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	ISS	Interproscan
BP	GO:0009826	unidimensional cell growth	NAS	Interproscan
BP	GO:0009827	plant-type cell wall modification	None	Extended
BP	GO:0009828	plant-type cell wall loosening	ISS	Interproscan
BP	GO:0009828	plant-type cell wall loosening	NAS	Interproscan
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	TAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003994	aconitate hydratase activity	IEP	HCCA
MF	GO:0004069	L-aspartate:2-oxoglutarate aminotransferase activity	IEP	HCCA
MF	GO:0004383	guanylate cyclase activity	IEP	HCCA
MF	GO:0004474	malate synthase activity	IEP	HCCA
MF	GO:0005496	steroid binding	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
CC	GO:0005777	peroxisome	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006101	citrate metabolic process	IEP	HCCA
BP	GO:0006102	isocitrate metabolic process	IEP	HCCA
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	HCCA
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006635	fatty acid beta-oxidation	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
BP	GO:0006775	fat-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006869	lipid transport	IEP	HCCA
BP	GO:0007031	peroxisome organization	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009062	fatty acid catabolic process	IEP	HCCA
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009639	response to red or far red light	IEP	HCCA
BP	GO:0009685	gibberellin metabolic process	IEP	HCCA
BP	GO:0009686	gibberellin biosynthetic process	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
BP	GO:0009756	carbohydrate mediated signaling	IEP	HCCA
BP	GO:0009845	seed germination	IEP	HCCA
BP	GO:0009933	meristem structural organization	IEP	HCCA
MF	GO:0009975	cyclase activity	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010162	seed dormancy process	IEP	HCCA
BP	GO:0010182	sugar mediated signaling pathway	IEP	HCCA
BP	GO:0010189	vitamin E biosynthetic process	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
BP	GO:0016042	lipid catabolic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
BP	GO:0016054	organic acid catabolic process	IEP	HCCA
BP	GO:0016101	diterpenoid metabolic process	IEP	HCCA
BP	GO:0016102	diterpenoid biosynthetic process	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016615	malate dehydrogenase activity	IEP	HCCA
MF	GO:0016849	phosphorus-oxygen lyase activity	IEP	HCCA
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	HCCA
BP	GO:0019395	fatty acid oxidation	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0019915	lipid storage	IEP	HCCA
BP	GO:0022611	dormancy process	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
BP	GO:0031329	regulation of cellular catabolic process	IEP	HCCA
BP	GO:0031998	regulation of fatty acid beta-oxidation	IEP	HCCA
BP	GO:0032365	intracellular lipid transport	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
MF	GO:0032934	sterol binding	IEP	HCCA
BP	GO:0034440	lipid oxidation	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042360	vitamin E metabolic process	IEP	HCCA
BP	GO:0042362	fat-soluble vitamin biosynthetic process	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044242	cellular lipid catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IEP	HCCA
BP	GO:0046320	regulation of fatty acid oxidation	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0046395	carboxylic acid catabolic process	IEP	HCCA
BP	GO:0046487	glyoxylate metabolic process	IEP	HCCA
MF	GO:0046912	acyltransferase, acyl groups converted into alkyl on transfer	IEP	HCCA
BP	GO:0048366	leaf development	IEP	HCCA
BP	GO:0048444	floral organ morphogenesis	IEP	HCCA
BP	GO:0048446	petal morphogenesis	IEP	HCCA
BP	GO:0048532	anatomical structure arrangement	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
MF	GO:0050342	tocopherol O-methyltransferase activity	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0050826	response to freezing	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0050994	regulation of lipid catabolic process	IEP	HCCA
BP	GO:0051235	maintenance of location	IEP	HCCA
MF	GO:0070026	nitric oxide binding	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	HCCA
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0080093	regulation of photorespiration	IEP	HCCA
BP	GO:0080167	response to karrikin	IEP	HCCA
BP	GO:0090332	stomatal closure	IEP	HCCA
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
BP	GO:1902652	secondary alcohol metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007117	Expansin_CBD	163	241
IPR009009	RlpA-like_DPBB	67	151

External Links

PLAZA 3.0 Dicots	AT5G05290

AT5G05290

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation