AT1G21340

Description : Dof-type zinc finger DNA-binding family protein

Gene families : OG_01_0000085 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G21340
Cluster	HCCA: Cluster_91

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT1G51700	No alias	DOF zinc finger protein 1	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G24060	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003951	NAD+ kinase activity	IEP	HCCA
MF	GO:0003978	UDP-glucose 4-epimerase activity	IEP	HCCA
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	HCCA
MF	GO:0005046	KDEL sequence binding	IEP	HCCA
MF	GO:0005048	signal sequence binding	IEP	HCCA
CC	GO:0005795	Golgi stack	IEP	HCCA
CC	GO:0005801	cis-Golgi network	IEP	HCCA
CC	GO:0005971	ribonucleoside-diphosphate reductase complex	IEP	HCCA
BP	GO:0006476	protein deacetylation	IEP	HCCA
BP	GO:0006621	protein retention in ER lumen	IEP	HCCA
BP	GO:0006664	glycolipid metabolic process	IEP	HCCA
BP	GO:0006741	NADP biosynthetic process	IEP	HCCA
MF	GO:0008131	primary amine oxidase activity	IEP	HCCA
BP	GO:0009186	deoxyribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	HCCA
BP	GO:0009969	xyloglucan biosynthetic process	IEP	HCCA
BP	GO:0010086	embryonic root morphogenesis	IEP	HCCA
BP	GO:0010411	xyloglucan metabolic process	IEP	HCCA
MF	GO:0016289	CoA hydrolase activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
BP	GO:0016575	histone deacetylation	IEP	HCCA
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	HCCA
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	HCCA
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0019374	galactolipid metabolic process	IEP	HCCA
BP	GO:0032507	maintenance of protein location in cell	IEP	HCCA
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	HCCA
BP	GO:0035601	protein deacylation	IEP	HCCA
MF	GO:0042277	peptide binding	IEP	HCCA
MF	GO:0042736	NADH kinase activity	IEP	HCCA
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	HCCA
BP	GO:0045185	maintenance of protein location	IEP	HCCA
MF	GO:0045543	gibberellin 2-beta-dioxygenase activity	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
MF	GO:0046923	ER retention sequence binding	IEP	HCCA
MF	GO:0047617	acyl-CoA hydrolase activity	IEP	HCCA
BP	GO:0048598	embryonic morphogenesis	IEP	HCCA
BP	GO:0051568	histone H3-K4 methylation	IEP	HCCA
BP	GO:0051651	maintenance of location in cell	IEP	HCCA
MF	GO:0052635	C-20 gibberellin 2-beta-dioxygenase activity	IEP	HCCA
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072595	maintenance of protein localization in organelle	IEP	HCCA
BP	GO:0098732	macromolecule deacylation	IEP	HCCA
BP	GO:1903509	liposaccharide metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	39	92

External Links

PLAZA 3.0 Dicots	AT1G21340

AT1G21340

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation