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  5. AT5G06350

AT5G06350


Description : ARM repeat superfamily protein


Gene families : OG_01_0002041 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G06350
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
Cre10.g442250 No alias No description available 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g11160.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0000469 cleavage involved in rRNA processing IEP HCCA
BP GO:0000478 endonucleolytic cleavage involved in rRNA processing IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0001933 negative regulation of protein phosphorylation IEP HCCA
MF GO:0003883 CTP synthase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004826 phenylalanine-tRNA ligase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006409 tRNA export from nucleus IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP HCCA
BP GO:0006469 negative regulation of protein kinase activity IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0007602 phototransduction IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009218 pyrimidine ribonucleotide metabolic process IEP HCCA
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009328 phenylalanine-tRNA ligase complex IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009585 red, far-red light phototransduction IEP HCCA
BP GO:0009626 plant-type hypersensitive response IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0010017 red or far-red light signaling pathway IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016032 viral process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019048 modulation by virus of host process IEP HCCA
BP GO:0031056 regulation of histone modification IEP HCCA
BP GO:0031060 regulation of histone methylation IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
BP GO:0031537 regulation of anthocyanin metabolic process IEP HCCA
BP GO:0031538 negative regulation of anthocyanin metabolic process IEP HCCA
BP GO:0031935 obsolete regulation of chromatin silencing IEP HCCA
BP GO:0032268 regulation of cellular protein metabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0033673 negative regulation of kinase activity IEP HCCA
BP GO:0034050 programmed cell death induced by symbiont IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035265 organ growth IEP HCCA
BP GO:0035821 modulation of process of other organism IEP HCCA
BP GO:0042326 negative regulation of phosphorylation IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0043609 regulation of carbon utilization IEP HCCA
BP GO:0044003 modulation by symbiont of host process IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
BP GO:0051031 tRNA transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051348 negative regulation of transferase activity IEP HCCA
BP GO:0051570 regulation of histone H3-K9 methylation IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
BP GO:0051702 biological process involved in interaction with symbiont IEP HCCA
BP GO:0051817 modulation of process of other organism involved in symbiotic interaction IEP HCCA
BP GO:0071322 cellular response to carbohydrate stimulus IEP HCCA
BP GO:0071324 cellular response to disaccharide stimulus IEP HCCA
BP GO:0071329 cellular response to sucrose stimulus IEP HCCA
BP GO:0071489 cellular response to red or far red light IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0071901 negative regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEP HCCA
BP GO:0097064 ncRNA export from nucleus IEP HCCA
MF GO:0097472 cyclin-dependent protein kinase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1990069 stomatal opening IEP HCCA
BP GO:2000024 regulation of leaf development IEP HCCA
BP GO:2000070 regulation of response to water deprivation IEP HCCA
InterPro domains Description Start Stop
IPR024679 Ipi1_N 147 212
PLAZA 3.0 Dicots AT5G06350