AT5G06800

Description : myb-like HTH transcriptional regulator family protein

Gene families : OG_01_0000253 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000253_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G06800
Cluster	HCCA: Cluster_174

Target	Alias	Description	ECC score	Gene Family Method	Actions
Pp3c19_2940V3.1	No alias	Homeodomain-like superfamily protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_8217V3.1	No alias	Homeodomain-like superfamily protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000014	single-stranded DNA endodeoxyribonuclease activity	IEP	HCCA
BP	GO:0000041	transition metal ion transport	IEP	HCCA
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
MF	GO:0004520	endodeoxyribonuclease activity	IEP	HCCA
MF	GO:0004536	deoxyribonuclease activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006308	DNA catabolic process	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006811	ion transport	IEP	HCCA
BP	GO:0006812	cation transport	IEP	HCCA
BP	GO:0006820	anion transport	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
BP	GO:0006857	oligopeptide transport	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
BP	GO:0008202	steroid metabolic process	IEP	HCCA
MF	GO:0008493	tetracycline transmembrane transporter activity	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009267	cellular response to starvation	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009641	shade avoidance	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	HCCA
BP	GO:0009804	coumarin metabolic process	IEP	HCCA
BP	GO:0009805	coumarin biosynthetic process	IEP	HCCA
BP	GO:0009806	lignan metabolic process	IEP	HCCA
BP	GO:0009807	lignan biosynthetic process	IEP	HCCA
BP	GO:0009812	flavonoid metabolic process	IEP	HCCA
BP	GO:0009813	flavonoid biosynthetic process	IEP	HCCA
BP	GO:0009991	response to extracellular stimulus	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010065	primary meristem tissue development	IEP	HCCA
BP	GO:0010067	procambium histogenesis	IEP	HCCA
BP	GO:0010106	cellular response to iron ion starvation	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
MF	GO:0010283	pinoresinol reductase activity	IEP	HCCA
BP	GO:0010359	regulation of anion channel activity	IEP	HCCA
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	HCCA
BP	GO:0010410	hemicellulose metabolic process	IEP	HCCA
BP	GO:0010413	glucuronoxylan metabolic process	IEP	HCCA
BP	GO:0010817	regulation of hormone levels	IEP	HCCA
MF	GO:0015665	alcohol transmembrane transporter activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transport	IEP	HCCA
BP	GO:0015833	peptide transport	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016128	phytosteroid metabolic process	IEP	HCCA
BP	GO:0016129	phytosteroid biosynthetic process	IEP	HCCA
BP	GO:0016131	brassinosteroid metabolic process	IEP	HCCA
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	HCCA
MF	GO:0016174	NAD(P)H oxidase H2O2-forming activity	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
BP	GO:0022898	regulation of transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
BP	GO:0031667	response to nutrient levels	IEP	HCCA
BP	GO:0031668	cellular response to extracellular stimulus	IEP	HCCA
BP	GO:0031669	cellular response to nutrient levels	IEP	HCCA
BP	GO:0032409	regulation of transporter activity	IEP	HCCA
BP	GO:0032412	regulation of ion transmembrane transporter activity	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034762	regulation of transmembrane transport	IEP	HCCA
BP	GO:0034765	regulation of ion transmembrane transport	IEP	HCCA
MF	GO:0035252	UDP-xylosyltransferase activity	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
MF	GO:0042285	xylosyltransferase activity	IEP	HCCA
BP	GO:0042445	hormone metabolic process	IEP	HCCA
BP	GO:0042446	hormone biosynthetic process	IEP	HCCA
BP	GO:0042594	response to starvation	IEP	HCCA
BP	GO:0042886	amide transport	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0043765	T/G mismatch-specific endonuclease activity	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	HCCA
BP	GO:0044070	regulation of anion transport	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
MF	GO:0045431	flavonol synthase activity	IEP	HCCA
BP	GO:0045491	xylan metabolic process	IEP	HCCA
BP	GO:0045492	xylan biosynthetic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0048508	embryonic meristem development	IEP	HCCA
BP	GO:0048768	root hair cell tip growth	IEP	HCCA
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0065008	regulation of biological quality	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	HCCA
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0071370	cellular response to gibberellin stimulus	IEP	HCCA
BP	GO:0071496	cellular response to external stimulus	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0120178	steroid hormone biosynthetic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
MF	GO:1901618	organic hydroxy compound transmembrane transporter activity	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1903959	regulation of anion transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025756	Myb_CC_LHEQLE	276	322
IPR001005	SANT/Myb	196	245

External Links

PLAZA 3.0 Dicots	AT5G06800

AT5G06800

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation