1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G08200

AT5G08200


Description : peptidoglycan-binding LysM domain-containing protein


Gene families : OG_01_0002576 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002576_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G08200
Cluster HCCA: Cluster_173


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0016998 cell wall macromolecule catabolic process ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
CC GO:0000813 ESCRT I complex IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004843 thiol-dependent deubiquitinase IEP HCCA
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP HCCA
BP GO:0006352 DNA-templated transcription, initiation IEP HCCA
BP GO:0006446 regulation of translational initiation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008242 omega peptidase activity IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009268 response to pH IEP HCCA
BP GO:0010082 regulation of root meristem growth IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010447 response to acidic pH IEP HCCA
MF GO:0010542 nitrate efflux transmembrane transporter activity IEP HCCA
MF GO:0015112 nitrate transmembrane transporter activity IEP HCCA
MF GO:0015513 high-affinity secondary active nitrite transmembrane transporter activity IEP HCCA
MF GO:0015562 efflux transmembrane transporter activity IEP HCCA
BP GO:0015706 nitrate transport IEP HCCA
MF GO:0016530 metallochaperone activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0031122 cytoplasmic microtubule organization IEP HCCA
MF GO:0033549 MAP kinase phosphatase activity IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043405 regulation of MAP kinase activity IEP HCCA
BP GO:0043407 negative regulation of MAP kinase activity IEP HCCA
BP GO:0043408 regulation of MAPK cascade IEP HCCA
BP GO:0043409 negative regulation of MAPK cascade IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0045489 pectin biosynthetic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0052325 cell wall pectin biosynthetic process IEP HCCA
MF GO:0080043 quercetin 3-O-glucosyltransferase activity IEP HCCA
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP HCCA
MF GO:0080045 quercetin 3'-O-glucosyltransferase activity IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1901562 response to paraquat IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902532 negative regulation of intracellular signal transduction IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G08200