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  5. AT5G08695

AT5G08695


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0003613 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003613_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G08695
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT5G05720 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009555 pollen development IEP HCCA
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity IEP HCCA
BP GO:0015695 organic cation transport IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0042886 amide transport IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 6 72
IPR000504 RRM_dom 538 610
IPR000504 RRM_dom 423 484
IPR000504 RRM_dom 229 299
IPR000504 RRM_dom 637 668
PLAZA 3.0 Dicots AT5G08695