AT5G10380

Description : RING/U-box superfamily protein

Gene families : OG_01_0009964 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G10380
Cluster	HCCA: Cluster_94

Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	RCA	Interproscan
BP	GO:0002238	response to molecule of fungal origin	IEP	Interproscan
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IDA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	RCA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008219	cell death	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	IEP	Interproscan
BP	GO:0009617	response to bacterium	RCA	Interproscan
BP	GO:0009627	systemic acquired resistance	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009863	salicylic acid mediated signaling pathway	None	Extended
BP	GO:0009867	jasmonic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010200	response to chitin	IEP	Interproscan
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	RCA	Interproscan
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0010942	positive regulation of cell death	None	Extended
BP	GO:0012501	programmed cell death	IC	Interproscan
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016143	S-glycoside metabolic process	None	Extended
BP	GO:0016144	S-glycoside biosynthetic process	None	Extended
BP	GO:0016567	protein ubiquitination	IDA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019757	glycosinolate metabolic process	None	Extended
BP	GO:0019758	glycosinolate biosynthetic process	None	Extended
BP	GO:0019760	glucosinolate metabolic process	None	Extended
BP	GO:0019761	glucosinolate biosynthetic process	RCA	Interproscan
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031348	negative regulation of defense response	RCA	Interproscan
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032268	regulation of cellular protein metabolic process	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0034976	response to endoplasmic reticulum stress	RCA	Interproscan
BP	GO:0035303	regulation of dephosphorylation	None	Extended
BP	GO:0035304	regulation of protein dephosphorylation	RCA	Interproscan
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043068	positive regulation of programmed cell death	IMP	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051865	protein autoubiquitination	IDA	Interproscan
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901657	glycosyl compound metabolic process	None	Extended
BP	GO:1901659	glycosyl compound biosynthetic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000377	regulation of reactive oxygen species metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000224	peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity	IEP	HCCA
BP	GO:0001666	response to hypoxia	IEP	HCCA
BP	GO:0001763	morphogenesis of a branching structure	IEP	HCCA
BP	GO:0002218	activation of innate immune response	IEP	HCCA
BP	GO:0002237	response to molecule of bacterial origin	IEP	HCCA
BP	GO:0002252	immune effector process	IEP	HCCA
BP	GO:0002253	activation of immune response	IEP	HCCA
BP	GO:0002376	immune system process	IEP	HCCA
BP	GO:0002679	respiratory burst involved in defense response	IEP	HCCA
BP	GO:0002684	positive regulation of immune system process	IEP	HCCA
BP	GO:0002833	positive regulation of response to biotic stimulus	IEP	HCCA
MF	GO:0004338	glucan exo-1,3-beta-glucosidase activity	IEP	HCCA
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	HCCA
MF	GO:0004708	MAP kinase kinase activity	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006788	heme oxidation	IEP	HCCA
BP	GO:0006882	cellular zinc ion homeostasis	IEP	HCCA
BP	GO:0006955	immune response	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0006995	cellular response to nitrogen starvation	IEP	HCCA
MF	GO:0008422	beta-glucosidase activity	IEP	HCCA
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	HCCA
MF	GO:0008810	cellulase activity	IEP	HCCA
BP	GO:0009267	cellular response to starvation	IEP	HCCA
BP	GO:0009403	toxin biosynthetic process	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
BP	GO:0009581	detection of external stimulus	IEP	HCCA
BP	GO:0009595	detection of biotic stimulus	IEP	HCCA
BP	GO:0009620	response to fungus	IEP	HCCA
BP	GO:0009625	response to insect	IEP	HCCA
BP	GO:0009636	response to toxic substance	IEP	HCCA
BP	GO:0009696	salicylic acid metabolic process	IEP	HCCA
BP	GO:0009697	salicylic acid biosynthetic process	IEP	HCCA
BP	GO:0009700	indole phytoalexin biosynthetic process	IEP	HCCA
BP	GO:0009751	response to salicylic acid	IEP	HCCA
BP	GO:0009759	indole glucosinolate biosynthetic process	IEP	HCCA
BP	GO:0009812	flavonoid metabolic process	IEP	HCCA
BP	GO:0009813	flavonoid biosynthetic process	IEP	HCCA
MF	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	IEP	HCCA
BP	GO:0009820	alkaloid metabolic process	IEP	HCCA
BP	GO:0009821	alkaloid biosynthetic process	IEP	HCCA
BP	GO:0009864	induced systemic resistance, jasmonic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009890	negative regulation of biosynthetic process	IEP	HCCA
BP	GO:0009991	response to extracellular stimulus	IEP	HCCA
BP	GO:0010044	response to aluminum ion	IEP	HCCA
BP	GO:0010112	regulation of systemic acquired resistance	IEP	HCCA
BP	GO:0010120	camalexin biosynthetic process	IEP	HCCA
BP	GO:0010188	response to microbial phytotoxin	IEP	HCCA
BP	GO:0010337	regulation of salicylic acid metabolic process	IEP	HCCA
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010628	positive regulation of gene expression	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
MF	GO:0015368	calcium:cation antiporter activity	IEP	HCCA
MF	GO:0015369	calcium:proton antiporter activity	IEP	HCCA
BP	GO:0015695	organic cation transport	IEP	HCCA
BP	GO:0015802	basic amino acid transport	IEP	HCCA
MF	GO:0015926	glucosidase activity	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016712	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016843	amine-lyase activity	IEP	HCCA
MF	GO:0016844	strictosidine synthase activity	IEP	HCCA
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	HCCA
BP	GO:0018958	phenol-containing compound metabolic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019684	photosynthesis, light reaction	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
BP	GO:0030026	cellular manganese ion homeostasis	IEP	HCCA
BP	GO:0031056	regulation of histone modification	IEP	HCCA
BP	GO:0031063	regulation of histone deacetylation	IEP	HCCA
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0031349	positive regulation of defense response	IEP	HCCA
BP	GO:0031667	response to nutrient levels	IEP	HCCA
BP	GO:0031668	cellular response to extracellular stimulus	IEP	HCCA
BP	GO:0031669	cellular response to nutrient levels	IEP	HCCA
BP	GO:0032103	positive regulation of response to external stimulus	IEP	HCCA
BP	GO:0032270	positive regulation of cellular protein metabolic process	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	HCCA
BP	GO:0036293	response to decreased oxygen levels	IEP	HCCA
BP	GO:0042168	heme metabolic process	IEP	HCCA
BP	GO:0042343	indole glucosinolate metabolic process	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:0042537	benzene-containing compound metabolic process	IEP	HCCA
BP	GO:0042594	response to starvation	IEP	HCCA
BP	GO:0042742	defense response to bacterium	IEP	HCCA
BP	GO:0043069	negative regulation of programmed cell death	IEP	HCCA
BP	GO:0043562	cellular response to nitrogen levels	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0043900	obsolete regulation of multi-organism process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0045087	innate immune response	IEP	HCCA
BP	GO:0045089	positive regulation of innate immune response	IEP	HCCA
BP	GO:0045727	positive regulation of translation	IEP	HCCA
BP	GO:0045730	respiratory burst	IEP	HCCA
BP	GO:0045892	negative regulation of transcription, DNA-templated	IEP	HCCA
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	HCCA
BP	GO:0046217	indole phytoalexin metabolic process	IEP	HCCA
BP	GO:0046283	anthocyanin-containing compound metabolic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0050778	positive regulation of immune response	IEP	HCCA
BP	GO:0050832	defense response to fungus	IEP	HCCA
BP	GO:0051253	negative regulation of RNA metabolic process	IEP	HCCA
BP	GO:0051258	protein polymerization	IEP	HCCA
BP	GO:0051606	detection of stimulus	IEP	HCCA
BP	GO:0052314	phytoalexin metabolic process	IEP	HCCA
BP	GO:0052315	phytoalexin biosynthetic process	IEP	HCCA
BP	GO:0052317	camalexin metabolic process	IEP	HCCA
BP	GO:0055062	phosphate ion homeostasis	IEP	HCCA
BP	GO:0055065	metal ion homeostasis	IEP	HCCA
BP	GO:0055069	zinc ion homeostasis	IEP	HCCA
BP	GO:0055071	manganese ion homeostasis	IEP	HCCA
BP	GO:0055081	anion homeostasis	IEP	HCCA
BP	GO:0060548	negative regulation of cell death	IEP	HCCA
BP	GO:0070482	response to oxygen levels	IEP	HCCA
BP	GO:0071496	cellular response to external stimulus	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0072506	trivalent inorganic anion homeostasis	IEP	HCCA
BP	GO:0072507	divalent inorganic cation homeostasis	IEP	HCCA
BP	GO:0080142	regulation of salicylic acid biosynthetic process	IEP	HCCA
BP	GO:0080167	response to karrikin	IEP	HCCA
BP	GO:0080181	lateral root branching	IEP	HCCA
BP	GO:0090311	regulation of protein deacetylation	IEP	HCCA
BP	GO:0098771	inorganic ion homeostasis	IEP	HCCA
BP	GO:1900055	regulation of leaf senescence	IEP	HCCA
BP	GO:1900056	negative regulation of leaf senescence	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
BP	GO:1902679	negative regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	134	177

External Links

PLAZA 3.0 Dicots	AT5G10380

AT5G10380

Expression Profile

Co-expression Networks

Functional Annotation