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  5. AT5G11220

AT5G11220


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG_01_0003531 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003531_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G11220
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AT1G64870 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G13620 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G24355 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005217 intracellular ligand-gated ion channel activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005385 zinc ion transmembrane transporter activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006829 zinc ion transport IEP HCCA
BP GO:0006873 cellular ion homeostasis IEP HCCA
BP GO:0009299 mRNA transcription IEP HCCA
BP GO:0009624 response to nematode IEP HCCA
BP GO:0030003 cellular cation homeostasis IEP HCCA
CC GO:0031350 intrinsic component of plastid membrane IEP HCCA
CC GO:0031351 integral component of plastid membrane IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G11220