AT5G11620

Description : SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related

Gene families : OG_01_0008269 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008269_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G11620
Cluster	HCCA: Cluster_128

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004630	phospholipase D activity	IEP	HCCA
MF	GO:0004816	asparagine-tRNA ligase activity	IEP	HCCA
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	HCCA
BP	GO:0005985	sucrose metabolic process	IEP	HCCA
BP	GO:0005986	sucrose biosynthetic process	IEP	HCCA
BP	GO:0006421	asparaginyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006825	copper ion transport	IEP	HCCA
BP	GO:0009408	response to heat	IEP	HCCA
BP	GO:0009820	alkaloid metabolic process	IEP	HCCA
BP	GO:0009821	alkaloid biosynthetic process	IEP	HCCA
BP	GO:0010496	intercellular transport	IEP	HCCA
BP	GO:0010497	plasmodesmata-mediated intercellular transport	IEP	HCCA
MF	GO:0015089	high-affinity copper ion transmembrane transporter activity	IEP	HCCA
MF	GO:0016157	sucrose synthase activity	IEP	HCCA
MF	GO:0016688	L-ascorbate peroxidase activity	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016843	amine-lyase activity	IEP	HCCA
MF	GO:0016844	strictosidine synthase activity	IEP	HCCA
CC	GO:0031224	intrinsic component of membrane	IEP	HCCA
CC	GO:0031225	anchored component of membrane	IEP	HCCA
BP	GO:0032890	regulation of organic acid transport	IEP	HCCA
BP	GO:0046466	membrane lipid catabolic process	IEP	HCCA
BP	GO:0051952	regulation of amine transport	IEP	HCCA
BP	GO:0051955	regulation of amino acid transport	IEP	HCCA
BP	GO:0080143	regulation of amino acid export	IEP	HCCA
BP	GO:0080165	callose deposition in phloem sieve plate	IEP	HCCA
BP	GO:1903789	regulation of amino acid transmembrane transport	IEP	HCCA
BP	GO:2000280	regulation of root development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007527	Znf_SWIM	59	87

External Links

PLAZA 3.0 Dicots	AT5G11620