Description : RING/U-box superfamily protein
Gene families : OG_01_0005301 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005301_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G12310 | |
Cluster | HCCA: Cluster_217 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0007062 | sister chromatid cohesion | RCA | Interproscan |
BP | GO:0007131 | reciprocal meiotic recombination | RCA | Interproscan |
MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
BP | GO:0033044 | regulation of chromosome organization | RCA | Interproscan |
BP | GO:0042138 | meiotic DNA double-strand break formation | RCA | Interproscan |
BP | GO:0045132 | meiotic chromosome segregation | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000578 | embryonic axis specification | IEP | HCCA |
BP | GO:0002229 | defense response to oomycetes | IEP | HCCA |
BP | GO:0002239 | response to oomycetes | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
MF | GO:0003713 | transcription coactivator activity | IEP | HCCA |
MF | GO:0004743 | pyruvate kinase activity | IEP | HCCA |
MF | GO:0004930 | G protein-coupled receptor activity | IEP | HCCA |
BP | GO:0006284 | base-excision repair | IEP | HCCA |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | HCCA |
MF | GO:0008020 | G protein-coupled photoreceptor activity | IEP | HCCA |
MF | GO:0008418 | protein-N-terminal asparagine amidohydrolase activity | IEP | HCCA |
BP | GO:0009739 | response to gibberellin | IEP | HCCA |
BP | GO:0009798 | axis specification | IEP | HCCA |
MF | GO:0009881 | photoreceptor activity | IEP | HCCA |
MF | GO:0009883 | red or far-red light photoreceptor activity | IEP | HCCA |
BP | GO:0009895 | negative regulation of catabolic process | IEP | HCCA |
BP | GO:0010506 | regulation of autophagy | IEP | HCCA |
BP | GO:0010507 | negative regulation of autophagy | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0016197 | endosomal transport | IEP | HCCA |
BP | GO:0018126 | protein hydroxylation | IEP | HCCA |
BP | GO:0018401 | peptidyl-proline hydroxylation to 4-hydroxy-L-proline | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019511 | peptidyl-proline hydroxylation | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0031329 | regulation of cellular catabolic process | IEP | HCCA |
BP | GO:0031330 | negative regulation of cellular catabolic process | IEP | HCCA |
MF | GO:0032182 | ubiquitin-like protein binding | IEP | HCCA |
BP | GO:0032509 | endosome transport via multivesicular body sorting pathway | IEP | HCCA |
BP | GO:0034635 | glutathione transport | IEP | HCCA |
BP | GO:0042939 | tripeptide transport | IEP | HCCA |
MF | GO:0043130 | ubiquitin binding | IEP | HCCA |
BP | GO:0045003 | double-strand break repair via synthesis-dependent strand annealing | IEP | HCCA |
BP | GO:0048366 | leaf development | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
MF | GO:0070628 | proteasome binding | IEP | HCCA |
BP | GO:0071985 | multivesicular body sorting pathway | IEP | HCCA |
BP | GO:0072337 | modified amino acid transport | IEP | HCCA |
BP | GO:0072348 | sulfur compound transport | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR018957 | Znf_C3HC4_RING-type | 43 | 85 |
PLAZA 3.0 Dicots | AT5G12310 |