1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G13130

AT5G13130


Description : Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein


Gene families : OG_01_0002653 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002653_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G13130
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Pp3c23_12740V3.1 No alias Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_05045.1 No alias auxiliary factor of DNA methylation pathway (MORC) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000987 cis-regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP HCCA
MF GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity IEP HCCA
MF GO:0004108 citrate (Si)-synthase activity IEP HCCA
MF GO:0004609 phosphatidylserine decarboxylase activity IEP HCCA
CC GO:0005945 6-phosphofructokinase complex IEP HCCA
BP GO:0006011 UDP-glucose metabolic process IEP HCCA
BP GO:0006323 DNA packaging IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
CC GO:0008278 cohesin complex IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
MF GO:0009008 DNA-methyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010032 meiotic chromosome condensation IEP HCCA
BP GO:0010424 DNA methylation on cytosine within a CG sequence IEP HCCA
MF GO:0010428 methyl-CpNpG binding IEP HCCA
MF GO:0010429 methyl-CpNpN binding IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
MF GO:0010491 UTP:arabinose-1-phosphate uridylyltransferase activity IEP HCCA
BP GO:0010528 regulation of transposition IEP HCCA
BP GO:0010529 negative regulation of transposition IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0017103 UTP:galactose-1-phosphate uridylyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031445 regulation of heterochromatin assembly IEP HCCA
BP GO:0031453 positive regulation of heterochromatin assembly IEP HCCA
BP GO:0031507 heterochromatin assembly IEP HCCA
BP GO:0032776 DNA methylation on cytosine IEP HCCA
BP GO:0033356 UDP-L-arabinose metabolic process IEP HCCA
MF GO:0035197 siRNA binding IEP HCCA
MF GO:0036440 citrate synthase activity IEP HCCA
BP GO:0040029 regulation of gene expression, epigenetic IEP HCCA
BP GO:0044089 positive regulation of cellular component biogenesis IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0046398 UDP-glucuronate metabolic process IEP HCCA
MF GO:0047268 galactinol-raffinose galactosyltransferase activity IEP HCCA
MF GO:0047338 UTP:xylose-1-phosphate uridylyltransferase activity IEP HCCA
MF GO:0047350 glucuronate-1-phosphate uridylyltransferase activity IEP HCCA
BP GO:0048240 sperm capacitation IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048830 adventitious root development IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051177 meiotic sister chromatid cohesion IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051316 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation IEP HCCA
BP GO:0051455 monopolar spindle attachment to meiosis I kinetochore IEP HCCA
MF GO:0051748 UTP-monosaccharide-1-phosphate uridylyltransferase activity IEP HCCA
BP GO:0051754 meiotic sister chromatid cohesion, centromeric IEP HCCA
BP GO:0052573 UDP-D-galactose metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
MF GO:0061980 regulatory RNA binding IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0070601 centromeric sister chromatid cohesion IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0080188 gene silencing by RNA-directed DNA methylation IEP HCCA
BP GO:0090308 regulation of DNA methylation-dependent heterochromatin assembly IEP HCCA
BP GO:0090309 positive regulation of DNA methylation-dependent heterochromatin assembly IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0120261 regulation of heterochromatin organization IEP HCCA
BP GO:0120263 positive regulation of heterochromatin organization IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:0140458 pre-transcriptional gene silencing by RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902275 regulation of chromatin organization IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905269 positive regulation of chromatin organization IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
BP GO:2000008 regulation of protein localization to cell surface IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
BP GO:2001252 positive regulation of chromosome organization IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G13130