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  5. AT5G14160

AT5G14160


Description : F-box family protein


Gene families : OG_01_0000101 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G14160
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G27580 No alias Protein of unknown function (DUF295) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G03610 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G04810 No alias Protein of unknown function (DUF295) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G03726 No alias Protein of unknown function (DUF295) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G03730 No alias F-box family protein with a domain of unknown function (DUF295) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22165 No alias F-box family protein with a domain of unknown function (DUF295) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003720 telomerase activity IEP HCCA
MF GO:0003721 telomerase RNA reverse transcriptase activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0004536 deoxyribonuclease activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006089 lactate metabolic process IEP HCCA
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007004 telomere maintenance via telomerase IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0009438 methylglyoxal metabolic process IEP HCCA
BP GO:0009662 etioplast organization IEP HCCA
BP GO:0010018 far-red light signaling pathway IEP HCCA
BP GO:0010833 telomere maintenance via telomere lengthening IEP HCCA
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEP HCCA
BP GO:0031221 arabinan metabolic process IEP HCCA
CC GO:0031350 intrinsic component of plastid membrane IEP HCCA
CC GO:0031351 integral component of plastid membrane IEP HCCA
CC GO:0031354 intrinsic component of plastid outer membrane IEP HCCA
CC GO:0031355 integral component of plastid outer membrane IEP HCCA
CC GO:0031358 intrinsic component of chloroplast outer membrane IEP HCCA
CC GO:0031359 integral component of chloroplast outer membrane IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032386 regulation of intracellular transport IEP HCCA
BP GO:0032388 positive regulation of intracellular transport IEP HCCA
BP GO:0033157 regulation of intracellular protein transport IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0035884 arabinan biosynthetic process IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042182 ketone catabolic process IEP HCCA
BP GO:0044088 regulation of vacuole organization IEP HCCA
BP GO:0044090 positive regulation of vacuole organization IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0046185 aldehyde catabolic process IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0050000 chromosome localization IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
BP GO:0051050 positive regulation of transport IEP HCCA
BP GO:0051222 positive regulation of protein transport IEP HCCA
BP GO:0051223 regulation of protein transport IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051596 methylglyoxal catabolic process IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
BP GO:0061727 methylglyoxal catabolic process to lactate IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0070201 regulation of establishment of protein localization IEP HCCA
BP GO:0070536 protein K63-linked deubiquitination IEP HCCA
BP GO:0071108 protein K48-linked deubiquitination IEP HCCA
BP GO:0071490 cellular response to far red light IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090316 positive regulation of intracellular protein transport IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1903829 positive regulation of protein localization IEP HCCA
BP GO:1904951 positive regulation of establishment of protein localization IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 16 57
PLAZA 3.0 Dicots AT5G14160