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  5. AT5G15340

AT5G15340


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0016332 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G15340
Cluster HCCA: Cluster_11


Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0001664 G protein-coupled receptor binding IEP HCCA
BP GO:0002218 activation of innate immune response IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002253 activation of immune response IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
BP GO:0002684 positive regulation of immune system process IEP HCCA
BP GO:0002833 positive regulation of response to biotic stimulus IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005275 amine transmembrane transporter activity IEP HCCA
CC GO:0005652 nuclear lamina IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008320 protein transmembrane transporter activity IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
BP GO:0009652 thigmotropism IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009873 ethylene-activated signaling pathway IEP HCCA
BP GO:0010052 guard cell differentiation IEP HCCA
BP GO:0010099 regulation of photomorphogenesis IEP HCCA
MF GO:0010178 IAA-amino acid conjugate hydrolase activity IEP HCCA
MF GO:0010179 IAA-Ala conjugate hydrolase activity IEP HCCA
BP GO:0010555 response to mannitol IEP HCCA
MF GO:0015450 protein-transporting ATPase activity IEP HCCA
MF GO:0015462 ABC-type protein transporter activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0019897 extrinsic component of plasma membrane IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022884 macromolecule transmembrane transporter activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
CC GO:0031234 extrinsic component of cytoplasmic side of plasma membrane IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
BP GO:0032103 positive regulation of response to external stimulus IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
CC GO:0034399 nuclear periphery IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045089 positive regulation of innate immune response IEP HCCA
BP GO:0045597 positive regulation of cell differentiation IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050778 positive regulation of immune response IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0051782 negative regulation of cell division IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140318 protein transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA
BP GO:1905421 regulation of plant organ morphogenesis IEP HCCA
BP GO:2000030 regulation of response to red or far red light IEP HCCA
BP GO:2000067 regulation of root morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 315 362
IPR002885 Pentatricopeptide_repeat 209 235
IPR002885 Pentatricopeptide_repeat 79 106
IPR002885 Pentatricopeptide_repeat 389 412
IPR002885 Pentatricopeptide_repeat 149 176
IPR032867 DYW_dom 488 613
PLAZA 3.0 Dicots AT5G15340