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  5. AT5G15620

AT5G15620


Description : F-box/RNI-like superfamily protein


Gene families : OG_01_0000021 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G15620
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT1G47915 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47920 No alias RNI-like superfamily protein 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G48400 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G52650 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G56610 No alias Protein with RNI-like/FBD-like domains 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G64540 No alias F-box/FBD-like domains containing protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G29930 No alias F-box/RNI-like superfamily protein 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42720 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G42770 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G44060 No alias F-box/RNI-like superfamily protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G44080 No alias F-box family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G44090 No alias F-box family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G44180 No alias syntaxin-related family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49150 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G54160 No alias RNI-like superfamily protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58875 No alias No description available 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58920 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58950 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58980 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G59160 No alias F-box/RNI-like superfamily protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G59180 No alias Protein with RNI-like/FBD-like domains 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G59190 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G00320 No alias F-box/RNI-like superfamily protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13960 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22280 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G27050 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G33560 No alias Wound-responsive family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38392 No alias No description available 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38396 No alias F-box/RNI-like superfamily protein 0.16 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G41630 No alias F-box/RNI-like superfamily protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G41830 No alias RNI-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0009555 pollen development IEP HCCA
CC GO:0015935 small ribosomal subunit IEP HCCA
CC GO:0022627 cytosolic small ribosomal subunit IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
MF GO:0097472 cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 3 43
IPR013101 Leu-rich_rpt_2 145 172
PLAZA 3.0 Dicots AT5G15620