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AT5G16450


Description : Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase


Gene families : OG_01_0002767 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002767_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G16450
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
AT3G02770 No alias Ribonuclease E inhibitor RraA/Dimethylmenaquinone... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000164 protein phosphatase type 1 complex IEP HCCA
MF GO:0004300 enoyl-CoA hydratase activity IEP HCCA
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP HCCA
MF GO:0004594 pantothenate kinase activity IEP HCCA
CC GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
BP GO:0006984 ER-nucleus signaling pathway IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009435 NAD biosynthetic process IEP HCCA
BP GO:0009853 photorespiration IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0010923 negative regulation of phosphatase activity IEP HCCA
MF GO:0016034 maleylacetoacetate isomerase activity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019336 phenol-containing compound catabolic process IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
CC GO:0031371 ubiquitin conjugating enzyme complex IEP HCCA
CC GO:0031372 UBC13-MMS2 complex IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0035305 negative regulation of dephosphorylation IEP HCCA
BP GO:0035308 negative regulation of protein dephosphorylation IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043132 NAD transport IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044375 regulation of peroxisome size IEP HCCA
CC GO:0045257 succinate dehydrogenase complex (ubiquinone) IEP HCCA
CC GO:0045281 succinate dehydrogenase complex IEP HCCA
CC GO:0045283 fumarate reductase complex IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
MF GO:0051750 delta3,5-delta2,4-dienoyl-CoA isomerase activity IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
BP GO:1901999 homogentisate metabolic process IEP HCCA
BP GO:1902000 homogentisate catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005493 RraA/RraA-like 6 159
PLAZA 3.0 Dicots AT5G16450