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  5. AT5G16820

AT5G16820


Description : heat shock factor 3


Gene families : OG_01_0000784 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000784_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G16820
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
MpVg00470.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity IMP Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009408 response to heat IMP Interproscan
BP GO:0009408 response to heat IEP Interproscan
BP GO:0009408 response to heat RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
MF GO:0005244 voltage-gated ion channel activity IEP HCCA
MF GO:0005249 voltage-gated potassium channel activity IEP HCCA
MF GO:0005261 cation channel activity IEP HCCA
MF GO:0005267 potassium channel activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006333 chromatin assembly or disassembly IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
CC GO:0008076 voltage-gated potassium channel complex IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
MF GO:0008324 cation transmembrane transporter activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0008643 carbohydrate transport IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015075 ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016246 RNA interference IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022843 voltage-gated cation channel activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
CC GO:0034702 ion channel complex IEP HCCA
CC GO:0034703 cation channel complex IEP HCCA
CC GO:0034705 potassium channel complex IEP HCCA
BP GO:0035194 post-transcriptional gene silencing by RNA IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0055062 phosphate ion homeostasis IEP HCCA
BP GO:0055081 anion homeostasis IEP HCCA
BP GO:0072506 trivalent inorganic anion homeostasis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 28 117
PLAZA 3.0 Dicots AT5G16820