AT5G17800

Description : myb domain protein 56

Gene families : OG_01_0000049 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G17800
Cluster	HCCA: Cluster_263

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT1G26780	No alias	myb domain protein 117	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_24650V3.1	No alias	myb domain protein 109	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000103	sulfate assimilation	IEP	HCCA
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0004364	glutathione transferase activity	IEP	HCCA
MF	GO:0004396	hexokinase activity	IEP	HCCA
MF	GO:0004623	phospholipase A2 activity	IEP	HCCA
CC	GO:0005615	extracellular space	IEP	HCCA
CC	GO:0005794	Golgi apparatus	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0007140	male meiotic nuclear division	IEP	HCCA
BP	GO:0007143	female meiotic nuclear division	IEP	HCCA
MF	GO:0008022	protein C-terminus binding	IEP	HCCA
MF	GO:0008083	growth factor activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009061	anaerobic respiration	IEP	HCCA
BP	GO:0009404	toxin metabolic process	IEP	HCCA
BP	GO:0009407	toxin catabolic process	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009611	response to wounding	IEP	HCCA
BP	GO:0009692	ethylene metabolic process	IEP	HCCA
BP	GO:0009693	ethylene biosynthetic process	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0009751	response to salicylic acid	IEP	HCCA
BP	GO:0009873	ethylene-activated signaling pathway	IEP	HCCA
BP	GO:0009961	response to 1-aminocyclopropane-1-carboxylic acid	IEP	HCCA
MF	GO:0009973	adenylyl-sulfate reductase activity	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010165	response to X-ray	IEP	HCCA
BP	GO:0010200	response to chitin	IEP	HCCA
BP	GO:0010243	response to organonitrogen compound	IEP	HCCA
BP	GO:0010540	basipetal auxin transport	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
MF	GO:0016298	lipase activity	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016629	12-oxophytodienoate reductase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
BP	GO:0022622	root system development	IEP	HCCA
MF	GO:0022821	potassium ion antiporter activity	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
MF	GO:0030545	signaling receptor regulator activity	IEP	HCCA
MF	GO:0030546	signaling receptor activator activity	IEP	HCCA
CC	GO:0031306	intrinsic component of mitochondrial outer membrane	IEP	HCCA
CC	GO:0031307	integral component of mitochondrial outer membrane	IEP	HCCA
CC	GO:0032592	integral component of mitochondrial membrane	IEP	HCCA
MF	GO:0042171	lysophosphatidic acid acyltransferase activity	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
BP	GO:0043200	response to amino acid	IEP	HCCA
BP	GO:0043449	cellular alkene metabolic process	IEP	HCCA
BP	GO:0043450	alkene biosynthetic process	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
MF	GO:0048018	receptor ligand activity	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051865	protein autoubiquitination	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0055088	lipid homeostasis	IEP	HCCA
BP	GO:0055089	fatty acid homeostasis	IEP	HCCA
BP	GO:0055090	acylglycerol homeostasis	IEP	HCCA
BP	GO:0055091	phospholipid homeostasis	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0070328	triglyceride homeostasis	IEP	HCCA
MF	GO:0071617	lysophospholipid acyltransferase activity	IEP	HCCA
MF	GO:0080043	quercetin 3-O-glucosyltransferase activity	IEP	HCCA
BP	GO:0080050	regulation of seed development	IEP	HCCA
BP	GO:0090333	regulation of stomatal closure	IEP	HCCA
CC	GO:0098573	intrinsic component of mitochondrial membrane	IEP	HCCA
BP	GO:0098754	detoxification	IEP	HCCA
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	HCCA
BP	GO:0120252	hydrocarbon metabolic process	IEP	HCCA
BP	GO:0120254	olefinic compound metabolic process	IEP	HCCA
BP	GO:0120255	olefinic compound biosynthetic process	IEP	HCCA
BP	GO:0140013	meiotic nuclear division	IEP	HCCA
BP	GO:1900673	olefin metabolic process	IEP	HCCA
BP	GO:1900674	olefin biosynthetic process	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:2000034	regulation of seed maturation	IEP	HCCA
BP	GO:2000693	positive regulation of seed maturation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	93	138
IPR001005	SANT/Myb	145	188

External Links

PLAZA 3.0 Dicots	AT5G17800

AT5G17800

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation