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  5. AT1G22510

AT1G22510


Description : RING/U-box protein with domain of unknown function (DUF 1232)


Gene families : OG_01_0003658 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G22510
Cluster HCCA: Cluster_76


Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000354 cis assembly of pre-catalytic spliceosome IEP HCCA
BP GO:0000578 embryonic axis specification IEP HCCA
CC GO:0000813 ESCRT I complex IEP HCCA
CC GO:0000932 P-body IEP HCCA
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000987 cis-regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
BP GO:0002218 activation of innate immune response IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002253 activation of immune response IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
BP GO:0002684 positive regulation of immune system process IEP HCCA
BP GO:0002833 positive regulation of response to biotic stimulus IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP HCCA
MF GO:0005354 galactose transmembrane transporter activity IEP HCCA
CC GO:0005686 U2 snRNP IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006626 protein targeting to mitochondrion IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0006884 cell volume homeostasis IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
BP GO:0009554 megasporogenesis IEP HCCA
BP GO:0009643 photosynthetic acclimation IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009851 auxin biosynthetic process IEP HCCA
BP GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009968 negative regulation of signal transduction IEP HCCA
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010262 somatic embryogenesis IEP HCCA
BP GO:0010501 RNA secondary structure unwinding IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0010648 negative regulation of cell communication IEP HCCA
CC GO:0015030 Cajal body IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015149 hexose transmembrane transporter activity IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
CC GO:0016604 nuclear body IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017151 DEAD/H-box RNA helicase binding IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0023057 negative regulation of signaling IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA IEP HCCA
BP GO:0031099 regeneration IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
CC GO:0035770 ribonucleoprotein granule IEP HCCA
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0043405 regulation of MAP kinase activity IEP HCCA
BP GO:0043407 negative regulation of MAP kinase activity IEP HCCA
BP GO:0043408 regulation of MAPK cascade IEP HCCA
BP GO:0043409 negative regulation of MAPK cascade IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045089 positive regulation of innate immune response IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
MF GO:0050072 m7G(5')pppN diphosphatase activity IEP HCCA
BP GO:0050778 positive regulation of immune response IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070297 regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
BP GO:0110154 RNA decapping IEP HCCA
BP GO:0110156 methylguanosine-cap decapping IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
BP GO:1900055 regulation of leaf senescence IEP HCCA
BP GO:1900056 negative regulation of leaf senescence IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902532 negative regulation of intracellular signal transduction IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR010652 DUF1232 130 164
PLAZA 3.0 Dicots AT1G22510