1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G19780

AT5G19780


Description : tubulin alpha-5


Gene families : OG_01_0000395 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000395_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G19780
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Cre03.g190950 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre04.g216850 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g00550.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c25_1010V3.1 No alias tubulin alpha-5 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_2000V3.1 No alias tubulin alpha-2 chain 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_08159.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005200 structural constituent of cytoskeleton ISS Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0007017 microtubule-based process TAS Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
CC GO:0016020 membrane IDA Interproscan
CC GO:0045298 tubulin complex ISS Interproscan
BP GO:0046686 response to cadmium ion IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
MF GO:0003878 ATP citrate synthase activity IEP HCCA
MF GO:0004128 cytochrome-b5 reductase activity, acting on NAD(P)H IEP HCCA
MF GO:0004563 beta-N-acetylhexosaminidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006085 acetyl-CoA biosynthetic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007584 response to nutrient IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0008444 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008652 cellular amino acid biosynthetic process IEP HCCA
MF GO:0009044 xylan 1,4-beta-xylosidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
CC GO:0009346 ATP-independent citrate lyase complex IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
MF GO:0010011 auxin binding IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010091 trichome branching IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0010152 pollen maturation IEP HCCA
BP GO:0010160 formation of animal organ boundary IEP HCCA
MF GO:0010329 auxin efflux transmembrane transporter activity IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010541 acropetal auxin transport IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0015929 hexosaminidase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
MF GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0017169 CDP-alcohol phosphatidyltransferase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0031122 cytoplasmic microtubule organization IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031225 anchored component of membrane IEP HCCA
CC GO:0031226 intrinsic component of plasma membrane IEP HCCA
BP GO:0031670 cellular response to nutrient IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0035384 thioester biosynthetic process IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043224 nuclear SCF ubiquitin ligase complex IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0043603 cellular amide metabolic process IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045013 carbon catabolite repression of transcription IEP HCCA
BP GO:0045014 carbon catabolite repression of transcription by glucose IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045990 carbon catabolite regulation of transcription IEP HCCA
BP GO:0046015 regulation of transcription by glucose IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
CC GO:0046658 anchored component of plasma membrane IEP HCCA
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048859 formation of anatomical boundary IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051513 regulation of monopolar cell growth IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0061984 catabolite repression IEP HCCA
BP GO:0061985 carbon catabolite repression IEP HCCA
BP GO:0061986 negative regulation of transcription by glucose IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071258 cellular response to gravity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071616 acyl-CoA biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
MF GO:0097599 xylanase activity IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:0120178 steroid hormone biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 392
IPR003008 Tubulin_FtsZ_GTPase 3 213
PLAZA 3.0 Dicots AT5G19780