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  5. AT5G20560

AT5G20560


Description : Glycosyl hydrolase superfamily protein


Gene families : OG_01_0006551 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006551_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G20560
Cluster HCCA: Cluster_91


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005675 transcription factor TFIIH holo complex IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
MF GO:0010428 methyl-CpNpG binding IEP HCCA
MF GO:0010429 methyl-CpNpN binding IEP HCCA
MF GO:0010488 UDP-galactose:N-glycan beta-1,3-galactosyltransferase activity IEP HCCA
BP GO:0010493 Lewis a epitope biosynthetic process IEP HCCA
CC GO:0015030 Cajal body IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
CC GO:0032806 carboxy-terminal domain protein kinase complex IEP HCCA
MF GO:0035250 UDP-galactosyltransferase activity IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
MF GO:0042736 NADH kinase activity IEP HCCA
MF GO:0045543 gibberellin 2-beta-dioxygenase activity IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0047617 acyl-CoA hydrolase activity IEP HCCA
BP GO:0051568 histone H3-K4 methylation IEP HCCA
MF GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0080188 gene silencing by RNA-directed DNA methylation IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
BP GO:0140458 pre-transcriptional gene silencing by RNA IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 34 336
PLAZA 3.0 Dicots AT5G20560