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  5. AT1G22880

AT1G22880


Description : cellulase 5


Gene families : OG_01_0000030 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G22880
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
AT1G70710 No alias glycosyl hydrolase 9B1 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G39000 No alias glycosyl hydrolase 9B17 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g273100 No alias No description available 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c26_160V3.1 No alias glycosyl hydrolase 9C3 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_27980V3.1 No alias glycosyl hydrolase 9A1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_9540V3.1 No alias glycosyl hydrolase 9A1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_01575.1 No alias no annotation 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0009505 plant-type cell wall IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
CC GO:0000323 lytic vacuole IEP HCCA
MF GO:0004311 farnesyltranstransferase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
CC GO:0009513 etioplast IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
CC GO:0009925 basal plasma membrane IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
MF GO:0010329 auxin efflux transmembrane transporter activity IEP HCCA
BP GO:0010453 regulation of cell fate commitment IEP HCCA
BP GO:0010455 positive regulation of cell fate commitment IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0045597 positive regulation of cell differentiation IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048829 root cap development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
CC GO:0098590 plasma membrane region IEP HCCA
MF GO:0098772 molecular function regulator IEP HCCA
BP GO:2000012 regulation of auxin polar transport IEP HCCA
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 25 473
PLAZA 3.0 Dicots AT1G22880