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  5. AT5G22670

AT5G22670


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG_01_0000057 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G22670
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G32020 No alias F-box family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G60400 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G66290 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G66320 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G66640 No alias RNI-like superfamily protein 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G78760 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G27505 No alias FBD-like domain family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G23955 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13985 No alias FBD-associated F-box protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G18770 No alias F-box/FBD-like domains containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22590 No alias Leucine Rich Repeat protein family 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22600 No alias FBD / Leucine Rich Repeat domains containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22680 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22720 No alias F-box/RNI-like superfamily protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22730 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G53840 No alias F-box/RNI-like/FBD-like domains-containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005402 carbohydrate:cation symporter activity IEP HCCA
CC GO:0005887 integral component of plasma membrane IEP HCCA
BP GO:0009901 anther dehiscence IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015114 phosphate ion transmembrane transporter activity IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:cation symporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
BP GO:0015749 monosaccharide transmembrane transport IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0018126 protein hydroxylation IEP HCCA
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP HCCA
BP GO:0019511 peptidyl-proline hydroxylation IEP HCCA
CC GO:0022625 cytosolic large ribosomal subunit IEP HCCA
CC GO:0031226 intrinsic component of plasma membrane IEP HCCA
BP GO:0034219 carbohydrate transmembrane transport IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006566 FBD 366 410
IPR013101 Leu-rich_rpt_2 158 182
IPR001810 F-box_dom 12 51
PLAZA 3.0 Dicots AT5G22670