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  5. AT5G22820

AT5G22820


Description : ARM repeat superfamily protein


Gene families : OG_01_0008250 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G22820
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
Mp3g16150.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006635 fatty acid beta-oxidation RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0016558 protein import into peroxisome matrix RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003727 single-stranded RNA binding IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
CC GO:0005677 chromatin silencing complex IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006029 proteoglycan metabolic process IEP HCCA
BP GO:0006349 regulation of gene expression by genetic imprinting IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006493 protein O-linked glycosylation IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
BP GO:0009100 glycoprotein metabolic process IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP HCCA
BP GO:0010384 cell wall proteoglycan metabolic process IEP HCCA
BP GO:0010404 cell wall hydroxyproline-rich glycoprotein metabolic process IEP HCCA
BP GO:0010405 arabinogalactan protein metabolic process IEP HCCA
CC GO:0012505 endomembrane system IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0018258 protein O-linked glycosylation via hydroxyproline IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0023052 signaling IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030422 production of siRNA involved in RNA interference IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP HCCA
MF GO:0035250 UDP-galactosyltransferase activity IEP HCCA
BP GO:0042773 ATP synthesis coupled electron transport IEP HCCA
BP GO:0042775 mitochondrial ATP synthesis coupled electron transport IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071514 genetic imprinting IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G22820