AT5G23780

Description : DOMAIN OF UNKNOWN FUNCTION 724 9

Gene families : OG_01_0001072 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001072_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G23780
Cluster	HCCA: Cluster_12

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006302	double-strand break repair	RCA	Interproscan
BP	GO:0006310	DNA recombination	None	Extended
BP	GO:0006312	mitotic recombination	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007059	chromosome segregation	None	Extended
BP	GO:0007062	sister chromatid cohesion	RCA	Interproscan
BP	GO:0007129	homologous chromosome pairing at meiosis	RCA	Interproscan
BP	GO:0007131	reciprocal meiotic recombination	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035825	homologous recombination	None	Extended
BP	GO:0042138	meiotic DNA double-strand break formation	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0045132	meiotic chromosome segregation	RCA	Interproscan
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0061982	meiosis I cell cycle process	None	Extended
BP	GO:0070192	chromosome organization involved in meiotic cell cycle	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	None	Extended
BP	GO:0098813	nuclear chromosome segregation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140527	reciprocal homologous recombination	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1903046	meiotic cell cycle process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
CC	GO:0000152	nuclear ubiquitin ligase complex	IEP	HCCA
BP	GO:0000280	nuclear division	IEP	HCCA
CC	GO:0000808	origin recognition complex	IEP	HCCA
CC	GO:0000811	GINS complex	IEP	HCCA
BP	GO:0002832	negative regulation of response to biotic stimulus	IEP	HCCA
MF	GO:0004725	protein tyrosine phosphatase activity	IEP	HCCA
MF	GO:0004834	tryptophan synthase activity	IEP	HCCA
CC	GO:0005680	anaphase-promoting complex	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
BP	GO:0006089	lactate metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006261	DNA-dependent DNA replication	IEP	HCCA
BP	GO:0006270	DNA replication initiation	IEP	HCCA
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
BP	GO:0006808	regulation of nitrogen utilization	IEP	HCCA
BP	GO:0007112	male meiosis cytokinesis	IEP	HCCA
BP	GO:0007349	cellularization	IEP	HCCA
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	HCCA
CC	GO:0008290	F-actin capping protein complex	IEP	HCCA
BP	GO:0009438	methylglyoxal metabolic process	IEP	HCCA
BP	GO:0009558	embryo sac cellularization	IEP	HCCA
BP	GO:0009909	regulation of flower development	IEP	HCCA
BP	GO:0009939	positive regulation of gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0010112	regulation of systemic acquired resistance	IEP	HCCA
BP	GO:0010113	negative regulation of systemic acquired resistance	IEP	HCCA
BP	GO:0010196	nonphotochemical quenching	IEP	HCCA
BP	GO:0010245	radial microtubular system formation	IEP	HCCA
BP	GO:0010325	raffinose family oligosaccharide biosynthetic process	IEP	HCCA
MF	GO:0010385	double-stranded methylated DNA binding	IEP	HCCA
BP	GO:0010452	histone H3-K36 methylation	IEP	HCCA
BP	GO:0010500	transmitting tissue development	IEP	HCCA
BP	GO:0015865	purine nucleotide transport	IEP	HCCA
BP	GO:0015867	ATP transport	IEP	HCCA
BP	GO:0015868	purine ribonucleotide transport	IEP	HCCA
MF	GO:0016278	lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	HCCA
BP	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	IEP	HCCA
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	IEP	HCCA
BP	GO:0030029	actin filament-based process	IEP	HCCA
BP	GO:0030832	regulation of actin filament length	IEP	HCCA
BP	GO:0030833	regulation of actin filament polymerization	IEP	HCCA
BP	GO:0030834	regulation of actin filament depolymerization	IEP	HCCA
BP	GO:0030835	negative regulation of actin filament depolymerization	IEP	HCCA
BP	GO:0030837	negative regulation of actin filament polymerization	IEP	HCCA
MF	GO:0030946	protein tyrosine phosphatase activity, metal-dependent	IEP	HCCA
CC	GO:0031261	DNA replication preinitiation complex	IEP	HCCA
BP	GO:0031333	negative regulation of protein-containing complex assembly	IEP	HCCA
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	HCCA
BP	GO:0032102	negative regulation of response to external stimulus	IEP	HCCA
BP	GO:0032271	regulation of protein polymerization	IEP	HCCA
BP	GO:0032272	negative regulation of protein polymerization	IEP	HCCA
BP	GO:0033206	meiotic cytokinesis	IEP	HCCA
MF	GO:0033984	indole-3-glycerol-phosphate lyase activity	IEP	HCCA
BP	GO:0042182	ketone catabolic process	IEP	HCCA
BP	GO:0043242	negative regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	HCCA
BP	GO:0046185	aldehyde catabolic process	IEP	HCCA
MF	GO:0046976	histone methyltransferase activity (H3-K27 specific)	IEP	HCCA
BP	GO:0048285	organelle fission	IEP	HCCA
BP	GO:0048444	floral organ morphogenesis	IEP	HCCA
BP	GO:0048446	petal morphogenesis	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
BP	GO:0048829	root cap development	IEP	HCCA
BP	GO:0048831	regulation of shoot system development	IEP	HCCA
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0051503	adenine nucleotide transport	IEP	HCCA
BP	GO:0051568	histone H3-K4 methylation	IEP	HCCA
BP	GO:0051596	methylglyoxal catabolic process	IEP	HCCA
BP	GO:0051693	actin filament capping	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0055070	copper ion homeostasis	IEP	HCCA
BP	GO:0061640	cytoskeleton-dependent cytokinesis	IEP	HCCA
BP	GO:0061727	methylglyoxal catabolic process to lactate	IEP	HCCA
BP	GO:0070734	histone H3-K27 methylation	IEP	HCCA
BP	GO:0080156	mitochondrial mRNA modification	IEP	HCCA
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
BP	GO:1900864	mitochondrial RNA modification	IEP	HCCA
BP	GO:1901879	regulation of protein depolymerization	IEP	HCCA
BP	GO:1901880	negative regulation of protein depolymerization	IEP	HCCA
BP	GO:1902904	negative regulation of supramolecular fiber organization	IEP	HCCA
BP	GO:1905392	plant organ morphogenesis	IEP	HCCA
BP	GO:1990066	energy quenching	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007930	DUF724	256	425
IPR008395	Agenet-like_dom	5	71

External Links

PLAZA 3.0 Dicots	AT5G23780

AT5G23780

Expression Profile

Co-expression Networks

Functional Annotation