1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G24180

AT5G24180


Description : Lipase class 3-related protein


Gene families : OG_01_0001553 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001553_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G24180
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT5G24230 No alias Lipase class 3-related protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G50890 No alias alpha/beta-Hydrolases superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000374 Group III intron splicing IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
BP GO:0010018 far-red light signaling pathway IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0042753 positive regulation of circadian rhythm IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
BP GO:0071490 cellular response to far red light IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0090351 seedling development IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 119 194
PLAZA 3.0 Dicots AT5G24180