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  5. AT5G25230

AT5G25230


Description : Ribosomal protein S5/Elongation factor G/III/V family protein


Gene families : OG_01_0002450 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G25230
Cluster HCCA: Cluster_160


Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity ISS Interproscan
CC GO:0005730 nucleolus IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
MF GO:0008135 translation factor activity, RNA binding ISS Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006021 inositol biosynthetic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006349 regulation of gene expression by genetic imprinting IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006641 triglyceride metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0008252 nucleotidase activity IEP HCCA
MF GO:0008308 voltage-gated anion channel activity IEP HCCA
MF GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity IEP HCCA
MF GO:0008934 inositol monophosphate 1-phosphatase activity IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
MF GO:0010347 L-galactose-1-phosphate phosphatase activity IEP HCCA
BP GO:0010380 regulation of chlorophyll biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0019374 galactolipid metabolic process IEP HCCA
BP GO:0019375 galactolipid biosynthetic process IEP HCCA
BP GO:0019432 triglyceride biosynthetic process IEP HCCA
BP GO:0019852 L-ascorbic acid metabolic process IEP HCCA
BP GO:0019853 L-ascorbic acid biosynthetic process IEP HCCA
BP GO:0031047 gene silencing by RNA IEP HCCA
BP GO:0031048 heterochromatin assembly by small RNA IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0040029 regulation of gene expression, epigenetic IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0044030 regulation of DNA methylation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0046460 neutral lipid biosynthetic process IEP HCCA
BP GO:0046463 acylglycerol biosynthetic process IEP HCCA
BP GO:0046505 sulfolipid metabolic process IEP HCCA
BP GO:0046506 sulfolipid biosynthetic process IEP HCCA
MF GO:0046507 UDPsulfoquinovose synthase activity IEP HCCA
MF GO:0046508 hydrolase activity, acting on carbon-sulfur bonds IEP HCCA
MF GO:0047184 1-acylglycerophosphocholine O-acyltransferase activity IEP HCCA
BP GO:0048564 photosystem I assembly IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
MF GO:0052731 phosphocholine phosphatase activity IEP HCCA
MF GO:0052732 phosphoethanolamine phosphatase activity IEP HCCA
MF GO:0052745 inositol phosphate phosphatase activity IEP HCCA
MF GO:0052834 inositol monophosphate phosphatase activity IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
MF GO:0070456 galactose-1-phosphate phosphatase activity IEP HCCA
BP GO:0071514 genetic imprinting IEP HCCA
MF GO:0071617 lysophospholipid acyltransferase activity IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
BP GO:1901334 lactone metabolic process IEP HCCA
BP GO:1901336 lactone biosynthetic process IEP HCCA
BP GO:1901463 regulation of tetrapyrrole biosynthetic process IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 124 409
IPR000640 EFG_V-like 826 914
IPR005517 Transl_elong_EFG/EF2_IV 714 823
IPR004161 EFTu-like_2 492 566
IPR031950 EFTUD2_N 4 98
PLAZA 3.0 Dicots AT5G25230