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AT5G28380


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0003224 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003224_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G28380
Cluster HCCA: Cluster_268


Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0000719 photoreactive repair IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003913 DNA photolyase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005887 integral component of plasma membrane IEP HCCA
BP GO:0006290 pyrimidine dimer repair IEP HCCA
BP GO:0007130 synaptonemal complex assembly IEP HCCA
MF GO:0008474 palmitoyl-(protein) hydrolase activity IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0009650 UV protection IEP HCCA
BP GO:0009873 ethylene-activated signaling pathway IEP HCCA
CC GO:0009898 cytoplasmic side of plasma membrane IEP HCCA
BP GO:0010098 suspensor development IEP HCCA
BP GO:0010466 negative regulation of peptidase activity IEP HCCA
BP GO:0010951 negative regulation of endopeptidase activity IEP HCCA
MF GO:0015204 urea transmembrane transporter activity IEP HCCA
BP GO:0015840 urea transport IEP HCCA
BP GO:0019755 one-carbon compound transport IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0030162 regulation of proteolysis IEP HCCA
MF GO:0032442 phenylcoumaran benzylic ether reductase activity IEP HCCA
BP GO:0045861 negative regulation of proteolysis IEP HCCA
BP GO:0048235 pollen sperm cell differentiation IEP HCCA
CC GO:0048555 generative cell nucleus IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
BP GO:0051865 protein autoubiquitination IEP HCCA
BP GO:0052547 regulation of peptidase activity IEP HCCA
BP GO:0052548 regulation of endopeptidase activity IEP HCCA
BP GO:0070193 synaptonemal complex organization IEP HCCA
BP GO:0080159 zygote elongation IEP HCCA
CC GO:0098552 side of membrane IEP HCCA
CC GO:0098562 cytoplasmic side of membrane IEP HCCA
MF GO:0098599 palmitoyl hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 348 377
IPR002885 Pentatricopeptide_repeat 110 137
IPR002885 Pentatricopeptide_repeat 311 335
IPR002885 Pentatricopeptide_repeat 256 280
IPR002885 Pentatricopeptide_repeat 177 202
PLAZA 3.0 Dicots AT5G28380