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Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28320.1); Has 2580 Blast hits to 2028 proteins in 270 species: Archae - 20; Bacteria - 158; Metazoa - 939; Fungi - 198; Plants - 144; Viruses - 14; Other Eukaryotes - 1107 (source: NCBI BLink).
Gene families : OG_01_0005768 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005768_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G28400 | |
| Cluster | HCCA: Cluster_114 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
| BP | GO:0000278 | mitotic cell cycle | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0000976 | transcription cis-regulatory region binding | IEP | HCCA |
| MF | GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0000979 | RNA polymerase II core promoter sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0001046 | core promoter sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0001067 | transcription regulatory region nucleic acid binding | IEP | HCCA |
| BP | GO:0003002 | regionalization | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | HCCA |
| MF | GO:0005253 | anion channel activity | IEP | HCCA |
| MF | GO:0005254 | chloride channel activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| CC | GO:0005819 | spindle | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006464 | cellular protein modification process | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006817 | phosphate ion transport | IEP | HCCA |
| BP | GO:0007015 | actin filament organization | IEP | HCCA |
| BP | GO:0007049 | cell cycle | IEP | HCCA |
| BP | GO:0007155 | cell adhesion | IEP | HCCA |
| BP | GO:0007389 | pattern specification process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008240 | tripeptidyl-peptidase activity | IEP | HCCA |
| MF | GO:0008308 | voltage-gated anion channel activity | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| CC | GO:0009527 | plastid outer membrane | IEP | HCCA |
| BP | GO:0009636 | response to toxic substance | IEP | HCCA |
| BP | GO:0009653 | anatomical structure morphogenesis | IEP | HCCA |
| CC | GO:0009707 | chloroplast outer membrane | IEP | HCCA |
| BP | GO:0009887 | animal organ morphogenesis | IEP | HCCA |
| BP | GO:0009888 | tissue development | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010019 | chloroplast-nucleus signaling pathway | IEP | HCCA |
| BP | GO:0010082 | regulation of root meristem growth | IEP | HCCA |
| BP | GO:0010090 | trichome morphogenesis | IEP | HCCA |
| BP | GO:0010104 | regulation of ethylene-activated signaling pathway | IEP | HCCA |
| BP | GO:0010105 | negative regulation of ethylene-activated signaling pathway | IEP | HCCA |
| BP | GO:0010383 | cell wall polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0010410 | hemicellulose metabolic process | IEP | HCCA |
| BP | GO:0010413 | glucuronoxylan metabolic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010628 | positive regulation of gene expression | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0010638 | positive regulation of organelle organization | IEP | HCCA |
| BP | GO:0010966 | regulation of phosphate transport | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| BP | GO:0016926 | protein desumoylation | IEP | HCCA |
| CC | GO:0019005 | SCF ubiquitin ligase complex | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019902 | phosphatase binding | IEP | HCCA |
| MF | GO:0019903 | protein phosphatase binding | IEP | HCCA |
| BP | GO:0022610 | biological adhesion | IEP | HCCA |
| BP | GO:0032270 | positive regulation of cellular protein metabolic process | IEP | HCCA |
| BP | GO:0032502 | developmental process | IEP | HCCA |
| BP | GO:0033043 | regulation of organelle organization | IEP | HCCA |
| BP | GO:0033044 | regulation of chromosome organization | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
| BP | GO:0034250 | positive regulation of cellular amide metabolic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0042743 | hydrogen peroxide metabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044038 | cell wall macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044257 | cellular protein catabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044267 | cellular protein metabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0045010 | actin nucleation | IEP | HCCA |
| BP | GO:0045491 | xylan metabolic process | IEP | HCCA |
| BP | GO:0045492 | xylan biosynthetic process | IEP | HCCA |
| BP | GO:0045596 | negative regulation of cell differentiation | IEP | HCCA |
| BP | GO:0045727 | positive regulation of translation | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| BP | GO:0048497 | maintenance of floral organ identity | IEP | HCCA |
| BP | GO:0048506 | regulation of timing of meristematic phase transition | IEP | HCCA |
| BP | GO:0048510 | regulation of timing of transition from vegetative to reproductive phase | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
| BP | GO:0048869 | cellular developmental process | IEP | HCCA |
| BP | GO:0050665 | hydrogen peroxide biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0055062 | phosphate ion homeostasis | IEP | HCCA |
| BP | GO:0055081 | anion homeostasis | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0070297 | regulation of phosphorelay signal transduction system | IEP | HCCA |
| BP | GO:0070298 | negative regulation of phosphorelay signal transduction system | IEP | HCCA |
| BP | GO:0070589 | cellular component macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0070592 | cell wall polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0070878 | primary miRNA binding | IEP | HCCA |
| MF | GO:0070883 | pre-miRNA binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072506 | trivalent inorganic anion homeostasis | IEP | HCCA |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0090700 | maintenance of plant organ identity | IEP | HCCA |
| BP | GO:0097435 | supramolecular fiber organization | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
| BP | GO:1902532 | negative regulation of intracellular signal transduction | IEP | HCCA |
| BP | GO:1903409 | reactive oxygen species biosynthetic process | IEP | HCCA |
| BP | GO:1903795 | regulation of inorganic anion transmembrane transport | IEP | HCCA |
| BP | GO:1990064 | ground tissue pattern formation | IEP | HCCA |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | HCCA |
| BP | GO:2000185 | regulation of phosphate transmembrane transport | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT5G28400 |