AT5G28640


Description : SSXT family protein


Gene families : OG_01_0001657 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001657_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G28640
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT1G01160 No alias GRF1-interacting factor 2 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003713 transcription coactivator activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008283 cell population proliferation IMP Interproscan
BP GO:0008283 cell population proliferation IEP Interproscan
BP GO:0008283 cell population proliferation RCA Interproscan
BP GO:0009955 adaxial/abaxial pattern specification IMP Interproscan
BP GO:0009965 leaf morphogenesis RCA Interproscan
BP GO:0048366 leaf development IMP Interproscan
BP GO:0048481 plant ovule development RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0001763 morphogenesis of a branching structure IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
BP GO:0003156 regulation of animal organ formation IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004860 protein kinase inhibitor activity IEP HCCA
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA
CC GO:0005640 nuclear outer membrane IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin assembly IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0007276 gamete generation IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009641 shade avoidance IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0010154 fruit development IEP HCCA
BP GO:0010158 abaxial cell fate specification IEP HCCA
BP GO:0010159 specification of animal organ position IEP HCCA
BP GO:0010160 formation of animal organ boundary IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010223 secondary shoot formation IEP HCCA
BP GO:0010338 leaf formation IEP HCCA
BP GO:0010346 shoot axis formation IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
BP GO:0010450 inflorescence meristem growth IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010492 maintenance of shoot apical meristem identity IEP HCCA
BP GO:0010496 intercellular transport IEP HCCA
BP GO:0010497 plasmodesmata-mediated intercellular transport IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 posttranscriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0016032 viral process IEP HCCA
BP GO:0016246 RNA interference IEP HCCA
BP GO:0016441 posttranscriptional gene silencing IEP HCCA
BP GO:0016569 obsolete covalent chromatin modification IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0030332 cyclin binding IEP HCCA
MF GO:0030337 DNA polymerase processivity factor activity IEP HCCA
BP GO:0031047 gene silencing by RNA IEP HCCA
BP GO:0031048 heterochromatin assembly by small RNA IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031225 anchored component of membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031507 heterochromatin assembly IEP HCCA
CC GO:0031965 nuclear membrane IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0035194 post-transcriptional gene silencing by RNA IEP HCCA
BP GO:0035265 organ growth IEP HCCA
BP GO:0035266 meristem growth IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0040009 regulation of growth rate IEP HCCA
BP GO:0040029 regulation of gene expression, epigenetic IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044000 movement in host IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0044766 multi-organism transport IEP HCCA
BP GO:0045165 cell fate commitment IEP HCCA
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0046620 regulation of organ growth IEP HCCA
BP GO:0046622 positive regulation of organ growth IEP HCCA
BP GO:0046739 transport of virus in multicellular host IEP HCCA
BP GO:0046794 transport of virus IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048439 flower morphogenesis IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
BP GO:0048448 stamen morphogenesis IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048455 stamen formation IEP HCCA
BP GO:0048504 regulation of timing of animal organ formation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048639 positive regulation of developmental growth IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0048859 formation of anatomical boundary IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0052126 movement in host environment IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061062 regulation of nematode larval development IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1902579 multi-organism localization IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000027 regulation of animal organ morphogenesis IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR007726 SS18_N 19 74
PLAZA 3.0 Dicots AT5G28640