1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G32440

AT5G32440


Description : Ubiquitin system component Cue protein


Gene families : OG_01_0001943 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001943_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G32440
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Zci_06218.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis RCA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0016049 cell growth RCA Interproscan
BP GO:0048193 Golgi vesicle transport RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
BP GO:0000303 response to superoxide IEP HCCA
BP GO:0000305 response to oxygen radical IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004416 hydroxyacylglutathione hydrolase activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
MF GO:0004758 serine C-palmitoyltransferase activity IEP HCCA
MF GO:0005483 soluble NSF attachment protein activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005770 late endosome IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006104 succinyl-CoA metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006670 sphingosine metabolic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
MF GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009561 megagametogenesis IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
MF GO:0010945 CoA pyrophosphatase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016408 C-acyltransferase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016454 C-palmitoyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016794 diphosphoric monoester hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0034613 cellular protein localization IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046512 sphingosine biosynthetic process IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048235 pollen sperm cell differentiation IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051865 protein autoubiquitination IEP HCCA
BP GO:0055046 microgametogenesis IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G32440