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  5. AT5G36228

AT5G36228


Description : nucleic acid binding;zinc ion binding


Gene families : OG_01_0000208 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G36228
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AT3G31430 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G42140 No alias zinc ion binding;nucleic acid binding 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G40595 No alias unknown protein; Has 30201 Blast hits to 17322 proteins... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP HCCA
BP GO:0006349 regulation of gene expression by genetic imprinting IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0071514 genetic imprinting IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR025836 Zn_knuckle_CX2CX4HX4C 172 220
IPR025558 DUF4283 33 170
PLAZA 3.0 Dicots AT5G36228