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No description available
Gene families : OG_01_0000021 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000021_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G38392 | |
| Cluster | HCCA: Cluster_44 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G47915 | No alias | F-box family protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G47920 | No alias | RNI-like superfamily protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G52650 | No alias | F-box/RNI-like superfamily protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT2G29930 | No alias | F-box/RNI-like superfamily protein | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G44080 | No alias | F-box family protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G44180 | No alias | syntaxin-related family protein | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G49150 | No alias | F-box/RNI-like superfamily protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G58820 | No alias | F-box/RNI-like superfamily protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G58860 | No alias | F-box/RNI-like superfamily protein | 0.08 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G58880 | No alias | F-box/RNI-like superfamily protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G58950 | No alias | F-box/RNI-like superfamily protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G58960 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G59000 | No alias | F-box/RNI-like superfamily protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G59170 | No alias | F-box/RNI-like superfamily protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G59230 | No alias | RNI-like superfamily protein | 0.08 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G59240 | No alias | RNI-like superfamily protein | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G62440 | No alias | F-box/RNI-like superfamily protein | 0.08 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G15620 | No alias | F-box/RNI-like superfamily protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G25860 | No alias | F-box/RNI-like superfamily protein | 0.09 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G35926 | No alias | Protein with RNI-like/FBD-like domains | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G38396 | No alias | F-box/RNI-like superfamily protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G41630 | No alias | F-box/RNI-like superfamily protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000959 | mitochondrial RNA metabolic process | IEP | HCCA |
| BP | GO:0000963 | mitochondrial RNA processing | IEP | HCCA |
| MF | GO:0005253 | anion channel activity | IEP | HCCA |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
| MF | GO:0008308 | voltage-gated anion channel activity | IEP | HCCA |
| MF | GO:0008509 | anion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009561 | megagametogenesis | IEP | HCCA |
| BP | GO:0010098 | suspensor development | IEP | HCCA |
| BP | GO:0010467 | gene expression | IEP | HCCA |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015296 | anion:cation symporter activity | IEP | HCCA |
| MF | GO:0015377 | cation:chloride symporter activity | IEP | HCCA |
| BP | GO:0016553 | base conversion or substitution editing | IEP | HCCA |
| BP | GO:0016554 | cytidine to uridine editing | IEP | HCCA |
| BP | GO:0033043 | regulation of organelle organization | IEP | HCCA |
| BP | GO:0033044 | regulation of chromosome organization | IEP | HCCA |
| BP | GO:0048598 | embryonic morphogenesis | IEP | HCCA |
| BP | GO:0080156 | mitochondrial mRNA modification | IEP | HCCA |
| BP | GO:0080159 | zygote elongation | IEP | HCCA |
| BP | GO:0140053 | mitochondrial gene expression | IEP | HCCA |
| BP | GO:1900864 | mitochondrial RNA modification | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT5G38392 |