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AT5G38960


Description : RmlC-like cupins superfamily protein


Gene families : OG_01_0000087 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G38960
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT5G39130 No alias RmlC-like cupins superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39160 No alias RmlC-like cupins superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009299 mRNA transcription IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
CC GO:0031350 intrinsic component of plastid membrane IEP HCCA
CC GO:0031351 integral component of plastid membrane IEP HCCA
BP GO:0080117 secondary growth IEP HCCA
BP GO:0080190 lateral growth IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 67 212
PLAZA 3.0 Dicots AT5G38960