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  5. AT5G39560

AT5G39560


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG_01_0000018 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G39560
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT1G19460 No alias Galactose oxidase/kelch repeat superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G19930 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G48190 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G60570 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G61540 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G22030 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G22050 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G22060 No alias BEST Arabidopsis thaliana protein match is: Galactose... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G29860 No alias Galactose oxidase/kelch repeat superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G44030 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G45406 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G08810 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G10510 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G27910 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G43710 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G46050 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G02310 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G11745 No alias Galactose oxidase/kelch repeat superfamily protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G11750 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19250 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19330 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19870 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G23580 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G33900 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G35120 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G39060 No alias BEST Arabidopsis thaliana protein match is: Galactose... 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G39560 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G39590 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G39750 No alias F-box family protein-related 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G39756 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G39760 No alias Galactose oxidase/kelch repeat superfamily protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G02980 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G02990 No alias Galactose oxidase/kelch repeat superfamily protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G02995 No alias No description available 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G03000 No alias Galactose oxidase/kelch repeat superfamily protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G28160 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38670 No alias Galactose oxidase/kelch repeat superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G51250 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0009507 chloroplast IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP HCCA
MF GO:0004150 dihydroneopterin aldolase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0009008 DNA-methyltransferase activity IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
MF GO:0009824 AMP dimethylallyltransferase activity IEP HCCA
MF GO:0015386 potassium:proton antiporter activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022821 potassium ion antiporter activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0052622 ATP dimethylallyltransferase activity IEP HCCA
MF GO:0052623 ADP dimethylallyltransferase activity IEP HCCA
BP GO:0060688 regulation of morphogenesis of a branching structure IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1905428 regulation of plant organ formation IEP HCCA
BP GO:2000032 regulation of secondary shoot formation IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 130 168
IPR006652 Kelch_1 171 215
IPR001810 F-box_dom 28 72
PLAZA 3.0 Dicots AT5G39560